Parascardovia denticolens: PSDT_0718
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Entry
PSDT_0718 CDS
T03978
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdo03016
]
PSDT_0718
Enzymes [BR:
pdo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PSDT_0718
Transfer RNA biogenesis [BR:
pdo03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PSDT_0718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BAR05237
LinkDB
All DBs
Position
865295..866788
Genome browser
AA seq
497 aa
AA seq
DB search
MMTVEEREPLPSAEKPVAEEATGGAAEAADSAEGSTAKAGRGKGLYYVHTLGCQMNVHDS
ERIAGVLESDGYVKANQVQIDSHDLDLIVMNTCAVRENASNRMYGTLGQWAELKRENPRL
QIAVGGCMAQKDRQRITERAPWVDAVFGTKNIGSLTGLLDKARAERRSQVQVATDLDYFP
SQLPVSRASRVSAWVAISMGCNNTCTFCIVPSVRGRERDRRPGDVLDEIQRCVDAGSKEV
TLLGQNVNSYGYSMGDRYAFSKLLRACGKIDGLERVRFTSPHPAAFTDDVIEAMAETPNV
MHQLHMPLQSGSDRILRAMRRSYRTAKFMDILGKVRAAMPDAQISTDVIVGFPGETEEDF
QRTLDLISQARFASAYTFEYSPRPGTPAALLPQIPADVMRDRYTRLHDLQEEITEEGLKA
FRGKEVEVMVTGQGRKDGNTHRITGREKTGTLVHIGPPEGYPAARVGDFVTCTVTDSARH
YLISDPDPAAGQTYSIR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggtcgaagaacgcgagcctttgccatcagctgaaaagcctgtggctgaggag
gcgaccggcggggctgccgaagccgccgactcggctgaaggatcgacggccaaggcgggg
cggggcaaagggctctattacgtccataccttgggctgccagatgaacgtgcatgattcc
gagcgcatcgccggcgtcctggaatcggacgggtacgtgaaggccaaccaagtccagatc
gattcccatgatctggacctgatcgtcatgaacacctgcgccgtgcgcgaaaacgcctcc
aaccgcatgtacgggaccttgggccagtgggcggaactcaaaagggagaacccccgcctg
cagatcgccgtcgggggttgcatggcccagaaggaccgccagcgtatcaccgaacgggcc
ccctgggtggacgccgtcttcgggaccaagaacatcggctctttgaccggtctcttggac
aaggcccgggccgagcggcgctcgcaagtgcaggtggctaccgacctggactatttcccc
agccagctccccgtctcccgcgcctcccgggtctcggcctgggtcgccatctccatgggc
tgcaacaacacctgcaccttctgcatcgttccatccgtgcgcggacgtgagagggaccgc
cgcccgggcgacgtcttggatgagatccagcggtgcgtggacgcaggatccaaagaggtg
accttgctggggcagaacgtcaattcgtacggttactccatgggggaccgctacgccttc
tccaaactcctgcgcgcctgcgggaagatcgatggcttggaacgggtgcgtttcacctcc
cctcacccggccgccttcaccgatgacgtcatcgaggccatggccgagacccccaacgtc
atgcatcagctgcacatgcctttgcagtccggctccgaccggatcctgcgggccatgcgt
cggtcctaccgcacggccaagttcatggacatcctcggcaaagtgcgtgcggccatgccg
gacgcccaaatcagcacggatgtgatcgtgggcttccccggagaaaccgaagaggatttc
caacggactctggacctcatctcccaggctcgtttcgcctccgcctacactttcgagtat
tccccccggccagggacccctgccgccttgctgccccagatcccggcggacgtcatgcgc
gaccgttacacccgcctgcacgacctgcaggaggagatcacggaagaggggctgaaggcc
ttccgcggcaaggaagtggaagtcatggtcaccggtcagggccggaaggacgggaacacc
caccggatcaccggccgggagaagacggggacgctggttcacatcggtcctccggaaggc
tacccggccgcccgggtgggcgatttcgtcacctgcaccgtcaccgattcggcccgccat
tatctgatttccgacccggatcccgccgctgggcagacttattcgatccggtga
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