Parascardovia denticolens: PSDT_0798
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Entry
PSDT_0798 CDS
T03978
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdo03009
]
PSDT_0798
Enzymes [BR:
pdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PSDT_0798
Ribosome biogenesis [BR:
pdo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSDT_0798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BAR05317
UniProt:
E6JYK3
LinkDB
All DBs
Position
complement(968425..969198)
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AA seq
257 aa
AA seq
DB search
MPHQYSRAAKAHEDSQEGVRLQKVLAQAGFGSRRKCETMITDGRVEVDGDLVTELGVRVD
PLHQEIRVDGSRIHISNRHVTLALNKPRKVLSTMDDPKGRWTLRDIVGDRYERIFHMGRL
DYDTEGLILMTDDGELAQHVMHPKYEVDKTYIATVEGHIGGSVCHRLVRTGVQLDDGWIK
LDQCSIIDQNRDRSVVKVVIHSGRNRIVRRVFGAIGFPVVKLIRTQIGPIKLGELKSGSY
RVLTGAEVNALHKAVGL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatcaatacagtcgcgccgccaaagcgcatgaagattctcaggaaggcgttcgc
cttcaaaaagtactcgcccaagccggctttggttcccgtcgtaaatgcgagaccatgatc
accgacggccgggtcgaggtcgatggggacctggtcaccgagctcggcgtccgggtggat
ccccttcaccaggagatccgggtcgacggttcccgcatccatatttccaaccgccatgtc
accttggccctcaacaagcctcggaaggtcctatccaccatggacgatcccaaaggccga
tggactttgagggacatcgtcggagaccggtatgaacggatcttccacatgggccgcctc
gattacgacaccgaagggctcatcctcatgaccgatgacggggagctggcccaacacgtc
atgcatcctaaatatgaggtggacaagacctacatcgccacggtggaaggccacatcggc
ggtagcgtctgccatcgcctggtccgtacgggggtccagctggatgacggctggatcaaa
ttggaccagtgctccatcatcgaccagaaccgggataggtccgtggtcaaagtggtcatc
cattccggtcgcaaccgcatcgtccgccgtgtcttcggcgccatcggcttccccgtggtc
aaactgatccgcacccagataggcccaatcaaactgggggagctcaaatccggctcttac
cgagtcctgaccggggctgaagtcaacgctcttcataaggcggtggggctatga
DBGET
integrated database retrieval system
