Parascardovia denticolens: PSDT_0850
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Entry
PSDT_0850 CDS
T03978
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo00061
Fatty acid biosynthesis
pdo00071
Fatty acid degradation
pdo01100
Metabolic pathways
pdo01212
Fatty acid metabolism
pdo02024
Quorum sensing
pdo04146
Peroxisome
Module
pdo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSDT_0850
00071 Fatty acid degradation
PSDT_0850
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSDT_0850
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSDT_0850
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdo01004
]
PSDT_0850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdo04147
]
PSDT_0850
Enzymes [BR:
pdo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSDT_0850
Lipid biosynthesis proteins [BR:
pdo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSDT_0850
Exosome [BR:
pdo04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSDT_0850
Exosomal proteins of breast cancer cells
PSDT_0850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAR05369
LinkDB
All DBs
Position
1034304..1036355
Genome browser
AA seq
683 aa
AA seq
DB search
MGFLDDVKEKVQGIVSARPAGKDAGQDGSGQADGPDYANPTDDFATEEEATTAIALPYTA
YWSDNYPTHTYIDETTGLLTSTTEGVEDIPHGMTIYSLYEDRARRTGDGPLFHIKDSGRW
ITKSANQALADIRSTAKGFIHQGLKKGDCVAFMCRTSYEWDVIDGAVLAIGGVLSTIYET
DSAAQIRTIVKNSDAKTLVVQSRDMLERAEGAIEDCPSLEKIYCLENGALQEIQAYGRAI
SDEELDERVDAVTLDDLATIVYTSGSTSAPKGVELTHRNLVAFALNINAYIPNLLADPTG
SILMFLPQAHNFARAINYGVVYSSIQVYIATGISTLISDLQEAKPTIMIGVPRVFEKVYN
AASQRAGHGVKGRIFASAAKTARSYMNAVAETGSAPLAERALHTAYGPLVYSALKEALGG
RPKWLVCGGAPLDPQLLSFFRGAGIPVYEGYGMTETSAPCTFNPLGTPFRPGSVGIVFPG
FSLRISEEGEIQMKGAGIFRQYHKNDEATKETFTEDGWVASGDLGTFTNDGFLYITGRKK
DLIITAGGKNVSPTPIEEAIRRCGLVSQAVVLGDKRPFISALVTLDEEGLRSWLEAQGLD
KNMPLTEAAENAAVRGEVQKYVDLANEGVSRAESVRKFIILPEDFSQENGLLTASMKVIR
PRVIKHYQRLLDTQMYTPRKRSK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctagatgacgtcaaggagaaagtgcaagggatcgtttccgctcgtcccgcc
ggcaaggatgccggacaggatggatccggacaggccgacggccccgattacgccaatccc
accgatgatttcgccacggaggaggaggcgaccacagccatcgccctcccctacaccgca
tactggtcggacaactaccccacccatacttacatcgacgagaccaccggcctgctcact
tccaccacggagggcgtggaggacatcccccacggcatgaccatctactccctctacgag
gaccgggcccgacgcaccggggatggtcctcttttccatatcaaggacagcgggcggtgg
atcaccaaaagcgccaaccaagccttggccgacatccgctccaccgccaaaggcttcatc
caccagggactcaagaagggcgactgcgtggctttcatgtgccggaccagctatgagtgg
gacgtcatcgacggggccgtcctggccatcggcggggtcctatctacgatctacgagacc
gactctgccgcccaaatccgcacgatcgtcaagaattccgacgccaagaccctggtggtc
cagtcccgggacatgctggaacgggccgaaggggccatcgaggactgcccatcgctggaa
aagatctattgcttggaaaacggggccttgcaggagatccaggcctatggccgcgccatc
tccgatgaggagctggacgaaagggtcgacgcggtcacccttgacgacctagccaccatc
gtctacacctccggatccacctcggcccccaagggggtggaactcacccaccgcaacctg
gtcgccttcgccctcaacatcaacgcctacatcccgaaccttttggccgaccccaccggg
tccatcctcatgttcctcccccaggcccacaatttcgcccgggccatcaactacggcgtg
gtttactcctccatccaggtctacatcgccaccggtatctccacgcttatctccgacctg
caagaggccaagccgaccatcatgatcggggtcccccgcgttttcgagaaggtctacaac
gccgcttcccagcgggccggccacggggtcaaaggacgcatcttcgcctccgccgccaag
accgcccgatcctacatgaacgcggtcgcggaaaccggttccgctcctttggccgaaagg
gccttgcacacagcttatgggcctttggtctactcggctttgaaggaagccctgggcggg
aggcccaaatggctggtttgcggaggcgcccccctggacccccagctgctcagcttcttc
cgcggcgccggcatccccgtctatgagggttatggcatgaccgagacctccgccccgtgc
accttcaatcctttgggcacccctttccgccccggctccgtgggcatcgtcttccccggc
ttctccctgcgcatcagcgaagaaggcgagatccagatgaagggggccggcatcttccgc
cagtaccacaagaacgacgaggccaccaaggagaccttcaccgaagacggctgggtcgct
tccggcgacttggggaccttcaccaacgacggcttcctttacatcaccggtcgtaagaag
gacctaatcatcaccgccggcggcaagaacgtctcccccaccccgatcgaagaggccatc
cgccgctgcggcctcgtctcccaggccgtcgtcttaggcgataagcgccccttcatctcc
gccttggtcaccctggatgaggaaggcctgcgcagctggctggaagcccagggcctggat
aagaacatgcccctgaccgaagccgccgaaaacgccgccgtgcgcggcgaagtccagaaa
tacgtggatctggccaacgaaggcgtctcccgggcggaatccgtccgcaagttcatcatc
ctacctgaagatttcagccaggagaacggcttgctgacagcctccatgaaggtgatccgc
ccccgggtcatcaagcattaccagcgtctgctggatacccagatgtacaccccccgtaag
cggagcaagtag
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