Parascardovia denticolens: PSDT_0864
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Entry
PSDT_0864 CDS
T03978
Name
(GenBank) aminotransferase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo00450
Selenocompound metabolism
pdo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PSDT_0864
Enzymes [BR:
pdo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PSDT_0864
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PSDT_0864
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BAR05383
LinkDB
All DBs
Position
complement(1049788..1051071)
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AA seq
427 aa
AA seq
DB search
MTDFAAIREQFPILNQEIHGNPLVYLDSAATAQKPRKVIEAEADFYQTINAGVHRGAHEL
AARSTEAFEAARAQVASLVGADCEPGAEELVVTAGATASLNLLATAFGNASAGCGGERAR
HFALKTGDEIVVTRAEHHSVLLPFQELAFRTGAALRWLDLTEDGRVRTDQQELESVITPR
TKVVAFTHVSNVTGAVTDVAAIVKRAHQVGALAILDACQSVPHMAVDFHALDVDFAAFSA
HKMYGPTGVGFLYGKRHLLEALPPAFFGGSMVELAWMNKPAQYMEPPARFEAGTQPVAQV
VAAGVAAQWMQKIGLPAFGEHEARLLPELLKLNQIEGVRVLGPVDRENRIATVAFDVEGV
HPHDVGQYIDSRGIAIRVGHHCAQPVHRHFGLYASNRASVGVYNTKDDIDRLLDAVSSVR
SFFGVRR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttgccgccatacgcgagcagttccccattctgaaccaagagattcatggg
aatccgctggtctatttggattccgccgcaacagcgcaaaagccgcggaaggtgattgag
gctgaggccgatttctaccagactatcaacgccggcgtgcaccggggggcccatgagctt
gccgcccgcagcacggaggctttcgaagccgcccgcgcccaggtggcttccttggtcggt
gccgactgtgagcctggcgccgaggagctggtggtgactgcaggggccacggccagcctt
aatctgctggccaccgctttcggcaacgcctcggccgggtgtgggggagagcgggcccgc
catttcgccctgaaaacaggcgatgagatagtcgtcacccgcgctgaacatcattcggtt
ttgctgcctttccaggagctggccttccggacgggagccgccttgcgctggttggacctg
accgaagacgggcgggtccgtaccgatcagcaggagctggaatcggtcatcaccccacgg
accaaggtcgtggccttcacccatgtgtcgaatgtgaccggggcggtcaccgatgtagcg
gccatcgtgaagagggcccatcaggtgggcgctctggccattttggacgcctgccagtcg
gtgccgcatatggccgtggatttccacgccctggatgtcgacttcgccgccttttccgcc
cataagatgtatgggccgaccggggtcggcttcctctatggcaagcgtcacctcttggag
gccttgccgccggcctttttcggcggatccatggtagagctggcttggatgaacaaaccg
gcccagtatatggagccccccgcccgcttcgaagccgggacccagccggtggcccaggtg
gtggcggccggggtcgcggcccaatggatgcagaagattggcctgcccgctttcggagag
cacgaggcccggcttctgcccgaactgctcaagctgaatcagatcgaaggggtgcgtgtt
ctcgggccggtcgacagggaaaaccgcatcgccaccgtcgcctttgacgtggaaggcgtg
catcctcatgacgtcggccagtatatcgactctcgcggaatcgctatccgggtgggccat
cattgcgcccaacccgtccaccggcattttggcctttacgcctccaaccgcgcttcggtg
ggcgtctacaacaccaaagacgacatcgaccgccttctggacgccgtctcttcggtccgc
tccttcttcggggtccgacgatga
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