Parascardovia denticolens: PSDT_0920
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Entry
PSDT_0920 CDS
T03978
Name
(GenBank) putative glycogen operon protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo00500
Starch and sucrose metabolism
pdo01100
Metabolic pathways
pdo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PSDT_0920
Enzymes [BR:
pdo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PSDT_0920
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
RF-1
Motif
Other DBs
NCBI-ProteinID:
BAR05439
UniProt:
E6K1L9
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All DBs
Position
1116459..1118918
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AA seq
819 aa
AA seq
DB search
MQIRPGSTYPLGSTYDGTGVNFALFSSVATKVELCLFDDYDKETRINITECNTFIWHIYL
VGVQPGQRYGYRVYGDYDSSRGLRCDPSKLLLDPYAKAIEGMIDSDASLFSYDINNPADP
TARNTADSADHTMKSVVINPYFDWGNDRHPEIAYNDSVIYEAHVRGMTNLNTQVPPELRG
TYAGLAHPSVVSYLKDLGITALELMPVHQFINDSFLQAKGLNNYWGYNTIGFFAPHNAYS
SSGQRGQQVNEFKTMVKAYHDAGIEIILDVVYNHTAEGNDMGPTLSFKGIDNSSYYRLVE
GDERHYFDTTGTGNSLLMRSPNTLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFSDVDK
LSAFFDIIHQDPVISNVKLIAEPWDVGSGGYQVGGFPPLWSEWNGMYRDTVRDFWRSQPS
KLPEFASRLLGSSDLYRADGRRPIASINFITAHDGFTMNDLVSYNDKHNDANGEGNRDGD
NNNRSWNCGVEGPTDLVDVNELRSQQMRNFMATMMVSQGIPMIDGGDEVMRTQQGNNNAY
CQDNAISWTHWDLDDRQQDLHDFVAKMVHLRLNHPVLHRRKFFDPSSDDASMPQVEWFDH
TGQVMDQNDWNNYNALTLMVFLNGHGIPETNDYGDPLVDNNFILIFNAYYEPLMFTLPGD
EYGRKWKLIVDTHDQYAPELSYEGGFSIMAQGRSFLLLMSDDGEDSVGAPNPDSAASDDS
SKSAPSAESASSADADQNSEESASADSLAETPAANAPEATAESTSEAPSDSETDGSEANE
SETPSASEADAAPSSSDESSSPDSDASANQSADTAPSAQ
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcgacctggttcaacctatcctctcggctccacctatgatggcacgggcgtc
aatttcgccctcttctcctccgtcgcgacgaaagtcgaactctgcctgttcgatgactat
gacaaggaaacccgcatcaacatcaccgaatgcaacactttcatctggcacatctacctt
gtaggcgtccagccagggcagcgctacgggtatcgggtctacggcgactacgattcctcc
cgcggcctgcggtgcgacccttccaagctcctgctcgacccttatgccaaggccatcgaa
ggcatgatcgattccgacgccagtctcttctcttacgacatcaacaatccggctgacccc
accgcccgtaacaccgcggattcggctgaccataccatgaaatcggtggtcatcaacccc
tacttcgactggggcaatgaccgccaccccgaaatcgcctacaacgacagcgtcatctac
gaagcccacgtccgcggcatgaccaacctgaacacccaggtcccgcccgaactgcgtggc
acctacgccggtctggcccatcccagcgtcgtctcctacctgaaagacctaggcatcacc
gctctggaactgatgcctgtccaccaattcatcaacgactccttcctccaagccaagggg
ctcaacaattactggggttacaacaccatcggcttcttcgccccccataacgcctactcc
agctctggccagcgcggccagcaggtgaatgagttcaagaccatggtcaaggcctaccat
gacgccggcatcgaaatcatcctggacgtggtctacaaccatacggccgaaggcaacgac
atggggcccaccctgagtttcaaaggcatcgacaactcatcttactaccgcctggtagaa
ggcgatgagaggcattatttcgataccaccggcaccgggaactccctgctcatgcggtcc
cccaacactctgcagctgatcatggattccttgcgttactgggtgaccgagatgcatgtg
gacggcttccgtttcgatctagccgccaccttggcccgccagttctccgacgtggataag
ctgtccgctttcttcgacatcatccaccaagacccggtcatctccaacgtcaagctgatc
gccgaaccttgggacgtgggctcaggcggttaccaagtgggaggtttccctcccctttgg
tcggaatggaacggcatgtacagggacaccgtccgcgatttctggcgttcccagccttcc
aagctgcccgaattcgccagccgtctgctgggctcgtccgacctttaccgggccgatggt
cgccgccccatcgcctccatcaacttcatcaccgcccacgacggcttcaccatgaacgac
ctcgtctcctacaacgacaagcacaacgacgccaacggggaaggcaaccgggacggggat
aacaacaaccgttcctggaactgcggggtggaagggcctaccgacctggtcgacgtcaat
gagctgcgcagccaacagatgcggaacttcatggcgaccatgatggtctcccaaggcatc
cccatgatcgatggcggcgacgaggtcatgcgcacccaacaaggcaataacaacgcctac
tgccaggacaacgccatctcctggacccactgggatctggatgaccgccaacaggacctg
cacgacttcgtcgccaagatggtccacctgcgcctcaaccacccggtcctccaccgacgt
aagttcttcgaccccagctccgacgacgcttccatgcctcaggtggaatggttcgaccat
accgggcaggtgatggatcagaacgactggaacaactacaacgccctgaccctcatggtc
ttcctcaatgggcatggcatcccagagaccaacgattacggcgaccccctggtggacaac
aacttcatcctcatcttcaacgcctactacgagcctctcatgttcacccttcctggcgat
gaatacggccgcaagtggaagttgatcgtcgacacccatgaccagtacgcccccgaactt
tcgtatgaaggaggattcagcatcatggcccaaggccgtagcttcctcctgctcatgagc
gatgatggcgaggactcggtcggtgccccgaacccggactctgcggcttcggatgattcc
agcaaatccgctccttccgcggaatccgcttcttcggcggatgcggaccaaaactcagag
gaaagcgcatcagctgactcccttgctgaaacccctgcagcgaatgctccggaagccacg
gcagagtctacttcagaggctccctcagattcggagactgacggctcggaagctaacgaa
tcggaaacgccgtccgcatcggaagccgatgcggccccctcctcatccgatgagtcttcc
tcccctgattccgacgcttccgcgaaccagtcggcggacacggcgccgtccgctcagtag
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