Parascardovia denticolens: PSDT_1039
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Entry
PSDT_1039 CDS
T03978
Name
(GenBank) Clp protease
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pdo03110
]
PSDT_1039
Chaperones and folding catalysts [BR:
pdo03110
]
Heat shock proteins
HSP100
PSDT_1039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
Sigma54_activat
AAA_16
ATPase_2
AAA_14
nSTAND3
AAA_7
IstB_IS21
TniB
AAA_18
AAA_24
Mg_chelatase
HOOK
T2SSE
NYD-SP28
AAA_3
NBD_SMAX1
ABC_tran
bpMoxR
Zeta_toxin
AAA_25
DNA_pol3_delta2
AAA_19
DUF937
ResIII
DUF5403
TSC22
VPS38
ABC_tran_CTD
DUF724
Motif
Other DBs
NCBI-ProteinID:
BAR05558
UniProt:
E6K195
LinkDB
All DBs
Position
complement(1268436..1271042)
Genome browser
AA seq
868 aa
AA seq
DB search
MSEKYTTLAQEALGDAIQSASAAGNPQVEPLHLLDSLLRQDGGVVRGLVQATGADPQSIG
AQTRRALAKLPSASGSATAQPDGSRQLSQVIASAQKEMKALEDEYVSTEHLLIGIAASDG
EAGEILRHAGASVEALRKAIPQVRGGAKVTSPDAEGSYKALEKYSTDLTEQAREGKLDPV
IGRDSEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPTGLRDKKIVSL
DMSSMVAGSKYRGEFEERMKAVLDEIKKSDGRIITFIDEIHTIVGAGATEGSMDAGNMLK
PMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGLKQRYEAH
HKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSEPEEIDELQRRVT
RLEMEEMQLKKSQDTASQERLAKIQSELADTREKLAGLNARWSAEKAGHNKVGDLRAKLD
DLRVQADKATREGDLEHASRILYGEIPQIRKELAAAEDSASAETAATGADGESAQEPMVP
DHVDADSIASIVSSWTGIPVGRLMQGENEKLLHMEEVLGKRVIGQKEAVAAVSDAVRRSR
AGISDLDRPTASFLFLGPTGVGKTELAKALADFLFDDEKAIVRIDMSEYMEKESVSRLIG
AAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVD
FKNTILILTSNLGSQFLVDSGLDADQRKSAVMDAVHAHFKPEFLNRLDDMIVFNPLTRDE
LAGIVDIQVARVADRLKERRITLDVTDSAREWLADTGYDPAYGARPLRRLVQNEVGDQLA
RMLLAGQVHDGDTVLVDQTGGDHLELSA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagtatacgaccttggcccaggaagccctcggcgacgccatccaatccgct
tccgcggccggaaatccccaggtggaaccccttcatctgctggattccctccttcgccaa
gatgggggcgtggtccgaggcctggtccaggccactggggccgatccacagtccatcggg
gctcaaacccgacgggcattggcaaagctgccttccgccagcggttcagccaccgcccag
cctgatggcagtcgtcaactttcccaggtcatcgcctccgcccaaaaagagatgaaggcc
ttggaggacgaatatgtgtccaccgaacacctgctcattggcatcgctgccagtgatggg
gaagcgggggagatccttcgccatgcgggggccagcgtggaagccttgcgcaaggccatc
ccccaagttcgaggcggagccaaagtcacttctcccgacgccgaaggctcttacaaggct
ctggaaaagtattccactgacttgaccgagcaggcccgggaaggcaaactggatccggtc
atcggccgcgattcggagatccgccgggtcatccagatcctctcccgccgcaccaagaac
aaccctgtcctcatcggcgagcccggcgtgggcaagaccgccgtggtggaaggcctggcc
caacgtgtggtggccggggatgtacctaccggtctgcgcgacaagaagatcgtctccttg
gatatgagctccatggtggccggcagcaaataccggggcgaattcgaagagcgcatgaag
gccgtcttggacgaaatcaagaagtccgacggccgcatcatcaccttcatcgacgaaatc
cataccatcgtgggggccggggccacggaaggatccatggacgccggcaacatgcttaag
cctatgctggcccgcggcgagctgcgtctgatcggtgccaccactctggatgagtaccgg
gagaacatcgagaaagacccggctttggagcgtaggttccaacaggtattcgtgggagag
cccagcgtggaggacacggtggccatccttcgcggcctcaaacagcgctacgaagcccat
cacaaagtgaccatcggggacgacgccctcgtggcagcagccaccttgtccaaccgttat
atttccggacgtcagttgccggacaaggccatcgatctggtggatgaggccgccgcccac
ctgcgcatggaactggattccgagcctgaggagatcgatgagctgcaacgccgcgtgacc
cgcctggaaatggaggagatgcagctgaagaagtcccaggatacggcttctcaggagcgc
ttggccaagatccaatccgagctggccgacacccgcgaaaaactggctggactgaacgcc
cggtggtctgcggagaaggccggtcacaacaaagtcggtgacttgcgcgccaagctggac
gatttgcgggttcaggccgataaggccacccgcgagggggacttggaacacgcttcccgc
atcctctatggggagatcccgcaaatccggaaggagctggccgccgctgaggacagcgcc
tccgcggagaccgccgcgactggcgcggacggggaatcagcccaggagcccatggtcccc
gatcacgtggacgctgattccatcgcctccatcgtctcctcctggaccggcatccccgtg
ggccgcctgatgcagggcgagaacgagaagctcctgcacatggaagaggtcttgggcaag
cgggtcattgggcagaaggaagcggtcgccgccgtctccgacgccgttcgccgctcccgg
gccggcatctccgacctcgaccgtcctaccgccagcttcctcttcctggggccgaccggc
gtgggcaagaccgagctggccaaggccctggctgacttcctctttgacgatgaaaaggcc
atcgtccgcatcgacatgagcgagtatatggaaaaggaatccgtctcccgcctgattggc
gccgcccctggctatatcggctacgaggaaggcggccagctgaccgaggccgttcgccgc
cgtccctactccgtcgttctcttcgacgaggtggaaaaggcccatccggaggtcttcgat
gtgctcctgcaggtcttggatgatggccgcctgaccgatggccaaggccggacggtggac
ttcaagaacaccatcctcatcctcacttccaacctgggctcccagtttctggtggattca
ggcctggacgccgaccagcgcaagagcgcggtcatggacgccgtacacgcccacttcaag
ccggagttcctcaaccgcttggatgacatgatcgtcttcaaccctctgacccgcgatgag
ctggctgggatcgtcgatattcaggtggctcgtgtggccgaccgactcaaggaacgtcgt
atcacccttgatgtgaccgattccgcccgtgaatggctggccgacaccggttacgacccg
gcttacggggcccgtcctttgcgccgcctggtgcagaacgaggtgggagaccaattggcc
cgcatgctcctagccgggcaggtgcacgacggtgacaccgtcttggtggaccagaccggg
ggcgaccatttggagctttccgcctga
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