Parascardovia denticolens: PSDT_1071
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Entry
PSDT_1071 CDS
T03978
Name
(GenBank) putative helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdo03032
]
PSDT_1071
03029 Mitochondrial biogenesis [BR:
pdo03029
]
PSDT_1071
Enzymes [BR:
pdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PSDT_1071
DNA replication proteins [BR:
pdo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
PSDT_1071
Mitochondrial biogenesis [BR:
pdo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
PSDT_1071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
AAA_5
NTPase_1
AAA_16
Viral_helicase1
TrwB_AAD_bind
AAA_24
nSTAND3
SH3_13
AAA
AAA_14
Herpes_Helicase
SLFN-g3_helicase
cobW
ATPase_2
AAA_7
Sigma54_activ_2
Zeta_toxin
AAA_17
NACHT
UvrD-helicase
AAA_18
NAT10_TcmA_helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAR05590
UniProt:
E6K159
LinkDB
All DBs
Position
complement(1309191..1310675)
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AA seq
494 aa
AA seq
DB search
MKQSQALAILSSGVPVFLTGAPGSGKTYVLNEFVDQARAQGLTVAMTASTGIAATHINGQ
TIHAWSGVGLDTVLTPDVLKRIKTRRRKAIKATDVLVIDEVSMIHAWLLDMVDEVCRAIK
RSDQPFGGIQVVMSGDLYQLPPVSKARTNADLVNAGLAYTNSRQRYAALGKDPEGYVTEA
LCWEVLDPVVCYLTEQHRQDDSQLLTVLSNIRSGQVSQDDCDLLTTRVGLLPKEGEATVH
LFPMNKTADTLNMAKLAQINQEEHVFLATEAGAAPLVDRLKKNMLAPQRLVLKVGATVMA
LRNDPERQYVNGSLGTVAGFLPGRKGGYPQVKFDNGHLVTMAPAAWETLDGEMVLASVNQ
VPLRLAWGITIHKSQGMTLDRAVMDLRRTFAPGMGYVALSRVENLEGLYLTGISNRAFLI
SQQAIMGDSDLRRASEAAAAILEKEGAASFRIQGEKQAQVGKGGRSSGRLAGQGADSDLD
SESVSDEFGQGQLF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagtcacaagcgctcgccatcctttccagcggggtgccggttttcctgactggg
gccccggggtcaggcaagacctacgtcctcaacgaattcgtcgaccaggcccgggcccaa
gggctcaccgtggccatgaccgcttccaccggcatcgccgccacccacatcaacggccag
accatccacgcctggtcgggagtcggcttggacacggtcctcaccccggatgtcctgaaa
cgcatcaaaacccggcggcgcaaggccatcaaggccacggacgtcctggtcatcgacgaa
gtctccatgattcatgcttggctgctggacatggtggacgaagtctgccgggcgatcaaa
cggtccgaccagcctttcggcggcatccaggtggtcatgtccggagacctttatcagctg
ccgccggtcagcaaagcccggaccaatgcggatctggtgaatgcgggcctggcttacacg
aattcgcgccagcgctatgcggccttgggcaaggacccggaaggctatgtgaccgaagcc
ctctgttgggaggtcctagatccggtcgtctgctacctgaccgagcagcatcgtcaggac
gatagccagctcttgaccgttctttcgaatatccgctccggccaggtcagccaggatgat
tgcgacctgttgacgactcgggtgggccttctgccgaaagagggggaggcgaccgtccac
ctcttcccgatgaacaagacggccgatacgctcaacatggccaagctggcacaaatcaac
caggaagagcatgttttcctggcgaccgaggccggggccgccccgctggtggacaggctc
aagaagaacatgctggctccgcagaggctggtcctcaaagtcggggcgacggtcatggcc
ttgcgcaacgatccggagcgccagtacgtcaacgggtctttggggacggtggccggcttc
ctgcccgggaggaaagggggatacccccaggtgaagttcgataatggccacttggtcacc
atggctccggccgcttgggagaccctggacggggagatggttctggcttcggtcaaccag
gtccccctgcgtctggcttgggggattaccatccacaagtcccaggggatgaccttggac
cgggcggtcatggacctgcgtcggactttcgctccagggatggggtatgtggccctgtcc
cgggtggagaatctggaaggcctttatctgacggggatcagcaaccgggccttcctcatc
tcccagcaggcgatcatgggggattccgatttgcggcgggcctccgaagccgcggcggcc
atcttggagaaggaaggggcggcctccttccggattcaaggcgaaaagcaggctcaggtc
ggtaagggcggccgatcttcgggaaggttggcaggacagggggcggattcggatttggat
tcggagtcggtctcggacgaattcggccaagggcagcttttctga
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