Parascardovia denticolens: PSDT_1176
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Entry
PSDT_1176 CDS
T03978
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_1176
DNA repair and recombination proteins [BR:
pdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSDT_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
Rad51
AAA_16
NACHT
AAA_24
AAA_22
ABC_tran
AAA_17
AAA
EAD2
nSTAND3
DUF7125
NTPase_1
MCM
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BAR05695
UniProt:
E6K0T4
LinkDB
All DBs
Position
1437072..1438472
Genome browser
AA seq
466 aa
AA seq
DB search
MAKSNVQYVCSDCGWNGAKWYGRCPNCGQWGTIEEFHEAKISPASSRASSAKPLSKKEKD
RILRPVTDEGLEDVVRIPTGFGEFDRVLGGGIVPGAVILMAGEPGIGKSTLLLETAGNIA
RSLVSTGKRVLYISGEESLSQIRMRARRIGAVVDNLLLASTMDLGTVVSLIQEEKPALAI
VDSVQTISSPDVDGIQGGNAQIRQVAAEVIDCAKSLDIPVILVGHVTKDGSIAGPRTLEH
LVDVVCQFEGDSQTALRLLRSLKNRFGPTDEVGCFDMSGEGIEEITDPSGLFVSAADQAA
EGTCITFIVDGHRSLPMEIQALTTSSALPAPRRTTNGVDYNRLAMIIAVLYRHGRINLLS
SDVYVSTVAGGSAREPGCDLAIAAALASASKGKAIARTTIAIGEISLTGQIRPVPRMANR
LREAARLGFTTALVPVHRKGSSWQQVEGMKLVEVATVKEALAALGI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcaaacgttcagtatgtatgctcggactgcggctggaacggagccaaatgg
tacggccgctgccccaactgcggccaatggggaacgatcgaggagttccacgaagccaag
atctcccctgcctcttcgcgcgcatcctccgccaaacccctcagtaagaaagagaaagac
cggattctgcgccccgtcaccgatgaggggctggaggacgtggtccgcatccccaccggt
ttcggcgaattcgaccgggttttaggcgggggcatcgtccccggggccgtcatcctcatg
gccggcgaaccaggaatcggcaaatccaccctcctgttggagaccgcgggaaacatagcc
cggtccctggtctccaccggaaagcgggtcctctacatctccggggaggaatcgctgagc
cagatccgcatgcgggcccggcgcatcggagcggtggtggacaacctgcttctggcttcc
accatggacctgggaaccgtggtctccctgattcaggaggaaaaacccgccctggccatc
gtggattccgtccagaccatctccagcccggacgtggacggcatccaaggaggcaacgcc
cagatcaggcaggtggcggcggaagtcatcgactgcgccaaaagcctggatatccccgtc
atcttggtcggtcatgtgaccaaggatgggtctatcgccggcccccgtactttggaacac
ttggtggatgtggtctgccagttcgaaggggacagccagaccgccttgcggcttttacgc
agtctgaagaaccgattcgggccgaccgacgaggtgggatgcttcgacatgagcggggaa
gggatcgaggagatcaccgaccccagcgggctcttcgtcagcgcggcggaccaggcggcc
gaagggacctgcatcactttcatcgtggacgggcaccgcagcctgccgatggagatccag
gccttgaccacctcttccgccctccccgccccgcgacggaccaccaatggggtggattac
aaccgcctggccatgatcatcgccgtcctctaccgccatggccgcatcaacctgctcagc
agcgacgtctacgtgtccaccgtggccggggggtcggcccgcgagccgggctgcgatctg
gccatcgccgcagccttggcttcggcttccaaaggcaaagccatcgcccggaccaccata
gccatcggggagatctccctgaccgggcagatccgccccgttccccggatggccaaccgc
ctgagggaagccgcccggctgggcttcaccacggccctggtccccgtccatcggaagggt
tcctcctggcagcaggtggaagggatgaaactggtggaagtggccacggtgaaagaggct
ttggccgccttagggatttag
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