Parascardovia denticolens: PSDT_1178
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Entry
PSDT_1178 CDS
T03978
Name
(GenBank) putative adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSDT_1178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_1178
Enzymes [BR:
pdo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PSDT_1178
DNA repair and recombination proteins [BR:
pdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSDT_1178
Prokaryotic type
PSDT_1178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Opy2
Motif
Other DBs
NCBI-ProteinID:
BAR05697
LinkDB
All DBs
Position
complement(1439588..1440514)
Genome browser
AA seq
308 aa
AA seq
DB search
MNQGFRATGKGDGAGDEAAWAFSRLSSWWRSAARDFPWRFGRTSPWGVLLSEVMSQQTPM
SRVLPYWRQWMGLWPTPQDLAQASTGDLIAAWGRLGYPRRALRLKECAQVVSQEFGGRLP
DDYQSLVALPGIGDYTASAILSFAYGDRVVVLDTNIRRVLVRAFTGQESRGGSTTKGERD
LAQSLLPADRAQSVRWNQAVMELGALICTASQPACDQCPLKEKCLFLAVGRPGLGSTRTR
PKQSFVGTNRQVRGIIIDALRRAPDHRLGPDQVRSLWKDQGQLDECVIGLDQDGLIVIGQ
DQSLSLPV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaggattcagggctaccgggaaaggggatggggctggcgacgaagccgcctgg
gccttctcccgcctgtcttcctggtggcggagtgcggcccgggacttcccctggcgcttc
ggccggaccagcccttggggggtgctcctgtcggaagtgatgagccagcagacccctatg
agccgggtccttccttactggcgccaatggatgggcctatggccgaccccgcaagacctg
gcccaggcctcgaccggggacctgatcgccgcttggggacggttgggctacccccggcgg
gctttgcgtctgaaggaatgcgctcaggtggtcagccaggagttcggtggtcgcttgccg
gacgattaccagtctttggtcgccttgccgggcatcggcgattacaccgcctccgccatc
ctctctttcgcctatggggacagggtcgtcgtcctggataccaacattcgccgcgtcctg
gtgcgggccttcaccggccaggaatcccggggcgggtccacgaccaagggggagagggac
ctggcccaaagcctcctgcctgccgaccgcgctcagtcggtcagatggaatcaggccgtg
atggagctgggggccttgatttgcaccgcttcccagcccgcttgcgaccaatgcccactc
aaggagaagtgcctcttcctggccgtcggccgtcccggcctcgggtccacaaggaccagg
ccgaagcagtccttcgtcgggaccaaccggcaagtgaggggaatcatcatcgacgctttg
cggcgggcgcccgatcaccggctggggccggatcaagtcaggtctttgtggaaggaccag
gggcagttggacgagtgcgtcatcggtctggatcaggatggcctcatcgtcattggtcag
gatcagtccctcagcctgcctgtctga
DBGET
integrated database retrieval system
