Parascardovia denticolens: PSDT_1293
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Entry
PSDT_1293 CDS
T03978
Name
(GenBank) amylopullulanase
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo00500
Starch and sucrose metabolism
pdo01100
Metabolic pathways
pdo01110
Biosynthesis of secondary metabolites
Module
pdo_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PSDT_1293
Enzymes [BR:
pdo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
PSDT_1293
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUD
Alpha-amylase
Alpha-amylase_C
CBM_48
Big_4
Pullul_strch_C
GlgB_N
CBM26
RuBisCO_large
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
BAR05812
UniProt:
E6K097
LinkDB
All DBs
Position
complement(1587790..1593429)
Genome browser
AA seq
1879 aa
AA seq
DB search
MWAMIASIAMILVGLVGIVPQAQATMPANTVTASGAASTTNRNVTIIAFQQNWKSIAKEC
TETYGPEGVGYVEVSPPSESIKGSQWWTSYQPVSYKLDSKEGTEADFKQMIATCKAAGVG
IIADAVINHTTGVDHPANVGVDGSKFDAQGNFPAIGYTKGDFHDCAKNIGNYNDANEVWN
CRLTGLQDLNTSKAQVQDKIADYMKHLLDDGVAGFRVDAVKHMDPKDVSAIKAKLAQKSG
MAEDKIYWNQETLGNANEDPRIQPSNYVSTGEVHEMNFPYRLKTAFNGGDGNVSGLKDLS
SKLLPSQEASVFVSNWDTERNASTLNYKDGSRYLLANAFMLAYGYGTPYINSGYKFEDSA
AGHDAGAPGATDTSVPDTVCSTDSGWLCTQRWTAIRGMIGFHNAVSGEVTNWWSNGSTAI
AFGRGTSGYLAINNSDQDISRTFTTGMPAGEYCDVYGAGDCSTTVKVGADGRLQATVPAH
SALAIHARSLKSVYQPGARSNPLDPAKDEPRQGPVDSDRTVNVYYKTSWKTPYLHYQKES
GWTDLPGVAMAKACDGYYTASMPLIGILDANHKQEFLFTDGGGNWDHPNGQSSGNYSISE
KADLLVADGKLSEVTAANNPCAVAYKPTTRLTVHYRPAAGDSVADKRGVYVWGTRKDGRV
LDGKNYQFNQSKDAFGKVFTMDFDGSFDKLGVIVTTTDWNKDGQSDRMVDVSGGSGEIWV
KGGDETTYITPPDEAGQTIKKLDVTVHYRRADNNYTGWDIWQWADGVADNIPAKFTDHDS
FGETALYSQSSGSGVKGSTFIIRYSDGTNDWASREAGKDNAEGHRVIPQSAIAMTGRDTA
RAEVWIVSGDTTVYTNPANIDTSDKIVSSEISQMNQVTIKLNHAVNHSDLEGKLSLKGAD
LRSFEVKDGTTVVITTKEAIPANAAVTVDAGSFGKATAVAGSVVRTDAFDKAYAYEGKDL
GASYTAASTTFKIWAPTASSVKLNSYKSTAADAALAKSYPMTAGAKGVWTVTLSGDCKDL
AYDFSLTFPDGKVNEAADPYGTASTVNGGRSVVLTPQEMKPAVWGKRLPAFTKPADAVIT
EMSVRDFSKSSTSGISAKNQGKYLGVVEEGSKNSKGESTGIDYLKKSGTTHVQIMPMYDF
NNVNGEIGNNVAYNWGYDPMNYNVPEGSYSSDPANPATRVVEAKKMVQGLHKAGIRVIMD
VVYNHVYDANKHVFNQVVPGYYFRYDAKGNLVSNSGCGNDTASERAMMRKYIVDSVTYWA
KNYNLDGFRFDLMGLIDKETMKEVRSALDQIDPSILVLGEGWDMNTTMEKSRMSIQPNGY
ELATDKSSVAFFNDSYRDAIKGSVFDKTGKGFVQGQFGQESLLANNFMGCQNQKGFAACT
NGNANVHYASANQLVQYVEVHDNLTLYDKLVASMPGVKQDELVKRDQLATAMVLLAQGVP
EMQLGQTFLRTKGGDDNSYNKPDSENAVDWDRLDQFKTSDDYARGLIALRKALPAFRLGS
YDQINSHVTVIAQKDGLLAFKLADASGTYLVAFNGNGKAMNLTGLKKGTYTVVSSDGAVD
SAAVKEIAAAVKNGSPNVRKAGSPKFQEVQVTDGTYSVPATSALVLKEGELLAQPAISQV
EDPDTIQIKSQGHLTLPQTVKATWTDGRTTMEKVTWPALTAEQKGIIASADGGEFSLNGT
VAGYGKPVTVVVKVAAASKPSEPSKPSEPSHPGKGKIVITLSLVRVRAGWKVRVMVKGLA
PHTAYVLWLHSSPVKLVAVTSNASGEVDRVVTIPVTTAPGKHQVLVTAASVSADKVLASA
PPDRSRFLAVRDRTAIAAGQARSFIPGREALPGRAGDSGRPEPGEGSSDHRRGRHLHPPG
HVRLRRFGSGPDRLAWQER
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggcgatgatcgcctcgatcgccatgattctggtcggcctggtgggtatcgtccct
caggctcaggccacgatgccggccaacacggtcacggcgagcggagcggcctccacgacc
aaccgcaacgtcaccatcatcgccttccagcagaactggaagtcgatcgccaaggaatgc
accgagacttatggtcccgaaggcgtgggctacgttgaggtctctcctccttccgagtcc
atcaaaggttcccagtggtggacttcctaccagccagtaagttacaagcttgattccaaa
gaaggcaccgaggccgacttcaagcagatgatcgccacttgcaaggccgctggcgtgggg
atcatcgccgacgccgtcatcaaccacacgaccggggtggaccatcccgcgaacgtgggc
gtggacggcagcaagttcgacgcccaaggtaatttcccggccatcggttacaccaagggc
gacttccacgattgcgccaagaacatcggcaattataatgatgcgaacgaggtctggaac
tgccgtctgaccggcctgcaggacctcaacaccagcaaggcccaggtccaggacaagata
gccgactacatgaagcatctgctggacgacggcgtggccggcttccgcgtggacgcggtc
aaacacatggaccccaaagacgtcagcgccatcaaggccaaactggcccagaagtccggc
atggccgaagacaagatctactggaatcaggagaccttgggcaacgccaacgaagacccg
cggatccagccatccaactatgtctccaccggcgaagtccatgagatgaacttcccctac
cgcctgaagacggccttcaacggcggggacggcaacgtgtccggtctcaaggacctgtcg
tccaagctcctaccttcccaggaggcttcggtcttcgtgtccaattgggacaccgaacgc
aacgccagcaccctcaactacaaggacggttcccgctacctcctggccaacgctttcatg
ctggcctacggctacggcaccccttacatcaattccggctacaagttcgaagacagcgcg
gccggccatgacgccggggctcccggggcaaccgatacctccgtgcccgatacggtctgc
tccaccgattccggctggctctgcacccagcgctggacggccatccggggcatgatcggc
ttccacaacgccgtcagcggcgaagtgacaaactggtggtccaacgggtcgacggccatc
gccttcggccgcgggaccagtggttacctggccatcaacaattccgaccaggacatcagc
cggaccttcactaccggcatgcccgccggcgaatactgcgacgtctacggggccggcgac
tgctccaccacggtgaaagtcggcgctgatggcaggctccaggccaccgtgcccgcccac
tccgccttggccatccacgccaggtccctcaagtcggtctaccagcccggggccaggtcc
aaccccctggatccggccaaggacgagccccgccaggggccggtggattccgaccggacc
gtcaacgtctactacaagaccagctggaagaccccttacctccattatcagaaggaatcg
ggttggacggacctccccggggtcgccatggccaaggcatgcgatggctattacacggcc
agcatgcccctgatcggcatcttggacgccaaccataagcaggagttcctcttcaccgac
ggcggcggcaactgggaccatcccaatggccagtccagcggcaactactccatcagcgag
aaggccgaccttctggtggctgatgggaagctgtccgaagtgaccgcggcgaacaaccct
tgcgccgtcgcctataagccgaccacccgcctgacagtccattaccggccggccgccggg
gattccgtggcggacaagcgcggggtctacgtctggggcacccgcaaggacggcagagtc
ctggatgggaagaactatcagttcaaccagagcaaggacgccttcggcaaggtcttcacc
atggacttcgacggctccttcgacaagctgggcgtcatcgtcaccaccaccgattggaac
aaggacgggcaaagcgaccgcatggtcgatgtgtccggcggctccggggagatctgggtc
aaaggcggcgatgagaccacctacatcaccccgccggacgaggccgggcagaccatcaag
aagctggacgtgaccgtccattaccgccgggcggacaacaattacaccggttgggacatc
tggcagtgggccgatggggtggcggacaacatccccgccaagttcaccgaccacgactcc
ttcggggagaccgccctctacagccagtcttccgggagcggggtgaaagggtccaccttc
atcatccgctacagcgacgggaccaacgactgggccagccgcgaagccggaaaagacaac
gccgaaggccaccgggtgatccctcagtcggccatcgccatgaccggcagggacacggcc
agggccgaagtctggatcgtctccggtgataccaccgtctacacgaatccagccaacatc
gacacttcggacaagatcgtctcctccgagatctcccagatgaaccaggtgaccatcaag
ctgaaccacgccgtcaaccattccgatctggaaggcaagctgagcctgaagggcgccgac
ctgcggtccttcgaagtgaaggacgggaccacggtcgtcatcacgaccaaggaggccatc
cccgccaacgccgcggtgaccgtggacgccggcagcttcgggaaggccacggctgtggcc
gggtccgtggtccgcaccgacgccttcgacaaggcttacgcctacgagggcaaggatctg
ggagccagctatacggccgcttccaccaccttcaagatctgggcccccacggcttcctcc
gtcaagctcaactcctacaagagcacggcggccgacgcggccttggccaagtcctatccg
atgaccgccggggccaaaggggtctggaccgtcaccctttctggcgattgcaaggatctg
gcttacgatttcagcctgaccttccccgacggtaaggtgaacgaagccgctgacccctat
gggaccgcctccaccgtcaacggcggccgttcggtcgtcctgaccccccaggagatgaag
ccggccgtatggggcaagcgcctgcccgccttcaccaagccggccgacgccgtcatcacc
gagatgtccgtgcgcgacttctccaagtcgtccacctccggcatctccgccaagaaccag
ggcaagtacctgggcgtggtggaagaaggcagcaagaattccaaaggggagtccaccggt
atcgactatctgaagaagtcgggaaccacccatgtgcagatcatgcccatgtacgacttc
aacaacgtcaacggcgagatcggcaacaacgtggcctacaactggggctacgacccgatg
aattacaacgtgcccgaaggctcctactcgtccgacccggccaatccggccaccagggtg
gtcgaggccaagaagatggtccaaggcctgcacaaggccgggatccgggtgatcatggac
gttgtctacaaccacgtctacgacgccaacaagcatgtcttcaaccaggtggtccccggt
tactacttccgttacgacgccaagggcaacctggtctccaactccggctgcggcaacgac
accgcctccgaacgggccatgatgcgcaagtacatcgtggattccgtcacctactgggcc
aagaactacaacctggacggcttccgtttcgacctcatgggcctcatcgacaaggagacc
atgaaggaggtgcgctcggccttggatcagatcgatccttccatcttggtcctcggcgaa
gggtgggacatgaacaccaccatggagaagagccggatgtccatccagcccaacggttat
gaattggccacggacaagtcttccgtcgccttcttcaacgattcctaccgcgacgccatc
aaaggcagcgtcttcgacaagaccggcaagggcttcgtccaagggcagttcggacaggaa
tccctgctggccaacaacttcatgggttgtcagaaccagaagggcttcgcggcctgcacc
aacgggaacgccaacgtccattacgcttcggccaaccagttggttcagtacgtggaggtc
catgacaacctgaccctctacgacaagctggtcgccagcatgccgggggtcaagcaggac
gaactagtcaaacgggaccagctggccacggccatggtcctgcttgcccaaggggtgccg
gagatgcagctggggcagaccttcctgaggaccaagggaggcgatgacaacagctacaac
aagccagacagcgagaacgcggtcgattgggatcggctggatcagttcaagaccagcgat
gattacgcccgtggcctgatcgctttgcgcaaggccctgccggctttccgtctgggctcc
tacgaccagatcaattcccacgtcaccgtgatcgcccagaaggatggcctcctggccttc
aagctggcggacgcttccggcacctacctggtcgccttcaacgggaacgggaaggccatg
aatctgaccggcctgaagaagggcacctacacggtcgtctcttcggacggcgcggtggat
tcggccgccgtcaaggagatcgcggccgccgtcaagaacggttcgcccaatgtgcgcaag
gcaggttcccccaagttccaggaggtgcaagtgaccgacggaacctattcggtcccggcc
accagcgctttggttctgaaggaaggcgagcttttggcccagcccgccatctcccaagtg
gaagatccggacaccatccagatcaagtcccagggccacctgaccctgccccagaccgtc
aaggccacgtggaccgacggccgcaccaccatggaaaaggtgacctggcccgccctgacc
gccgagcagaaaggcatcatcgcctccgctgacgggggagagttctccttgaacgggacc
gtggccggctatggcaagccggtgacggtggtggtgaaggtggcggcggcttccaagccg
tcggagccatccaagccttccgagccgtcccaccctggtaaggggaagatcgtgatcacc
cttagcctggtacgggtccgcgctggctggaaggtccgcgtgatggtcaaaggtctggcc
ccgcacaccgcctatgtgctctggctgcattcctctccggtcaagttggtcgcggtgacg
tccaacgcctccggcgaggtggaccgggtggtgaccatccccgtcaccaccgcccccggg
aagcatcaggtcctggtgacggccgcttccgtctccgctgacaaggtcctggcctccgcc
ccccctgaccgttctcgcttcctcgcagtccgggaccgcacagccatcgcagccggccaa
gcccgctccttcatcccaggccgcgaagccctcccaggccgggcgggagactcgggccga
ccggaaccgggagaaggatctagcgaccaccggcgtggccgtcacctccatcctcctggc
catgttcggcttcgccggtttgggtctggccctgaccgccttgcgtggcaagagcgataa
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