Parascardovia denticolens: PSDT_1314
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Entry
PSDT_1314 CDS
T03978
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSDT_1314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdo03021
]
PSDT_1314
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_1314
Enzymes [BR:
pdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSDT_1314
Transcription machinery [BR:
pdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSDT_1314
DNA repair and recombination proteins [BR:
pdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSDT_1314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BAR05833
UniProt:
E6K074
LinkDB
All DBs
Position
complement(1619712..1620707)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPSLTEEQINPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTALPGVKEDVAEILLNIKELVLTSEYDEPVVMYLRKSGEGEATAADITPPAGVVVAN
PDLHIATLAEDGELEIEFTVERGRGYVPAQMNKQEGDEIGRIPVDSIYSPVLKVSYKVDP
TRVEQRTDFDKLTVDVETKPSISPRDAVASAGSTLVELFGLFHELNNQAEGVEVGPAPVV
EEVDPQMEIPIEDLNLTQRSYNCLKREGIHTIGELVKRSEQDLLDIRNFGQKSIDEVKEK
LDSMGLSLKQSPLGLGQIDLEGDNFFSPEDI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtccgtcacttactgaggaacaaatcaatccccagcgttcccgc
ttcaccatcgagcctctggagccaggattcggttacactttgggcaactccctgcgccgc
accctgctgagttcgatccctggggcagcagtgacatcagtgcgtatctccggagccctg
catgagttcaccgctctgccaggcgtgaaggaagacgtcgctgagattcttttgaacatc
aaggagctcgttcttacttccgagtatgatgagcccgtcgtgatgtatctgcgcaagagc
ggcgagggtgaggcgaccgcggctgacatcacccctccggccggtgtggtggtcgccaac
cccgacctgcacatcgcgactcttgccgaagatggcgaactcgaaatcgaattcaccgtg
gaacgtggacgtggttatgtccccgcacagatgaacaagcaggaaggcgatgaaatcggc
cgcatccctgtggactccatctactccccagtgctcaaggtgagctacaaggtcgacccc
acccgtgtggaacagcgtaccgacttcgataagctcactgtggatgtggaaaccaagcct
tccatctccccccgcgacgcggtggcctccgccggttccactctggtcgagctcttcggg
ctcttccatgagctgaacaaccaggccgaaggcgtggaggtgggcccggcccccgtggtc
gaagaggtcgatccccagatggagatccccatcgaggacctgaacctgacccagcgctcc
tacaattgcctgaagcgcgagggaatccacaccattggtgaattggtcaagaggtctgag
caggacctgcttgatattcgtaattttggccagaagtccatcgacgaagtgaaggagaag
ctcgactccatgggcctttccttgaagcagtcccccttgggccttggccagatcgatctt
gaaggtgataacttcttcagccctgaagacatctga
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