Parascardovia denticolens: PSDT_1354
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Entry
PSDT_1354 CDS
T03978
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdo03016
]
PSDT_1354
Enzymes [BR:
pdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSDT_1354
Transfer RNA biogenesis [BR:
pdo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSDT_1354
Prokaryotic type
PSDT_1354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAR05873
UniProt:
E6JZY3
LinkDB
All DBs
Position
complement(1649819..1650799)
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AA seq
326 aa
AA seq
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MPSPLLPDSGVMVVDKPQGVTSHDVVAAARRLLHTRKVGHAGTLDPMATGVLVLGFGKAT
RLLNAITDADKTYETVIRLGQATTTDDAEGELTGFFDLSAISRQMIWEAAKKLTGRIQQV
PSAYSAIKVNGRRSYDLARQGEEVHLPARPVTIEEFTILSVDEAQAGATPVLDVHARVTC
SSGTYIRSLGRDLGSLLGVGAHLIMLRRLRVGKFGLTSAAIATVGEHRFVNRRGEEICRP
EVVFDPPVVKDPAAFCLSPAQAASLTMPVVPISEEEKVALSHGIALPIPVTGLTAAITAT
DHELVALLEPWKHHQAKPATVFLPAQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcccccttcttcctgattccggcgtcatggtggtggataagccccaaggcgtc
acctcccatgacgtggtcgccgccgcccgcaggctgctgcataccaggaaagtcggccac
gccggcactttggacccgatggccaccggcgtcctcgtcctgggctttggcaaggccacg
cgtctgctcaacgccatcacggatgcggataagacttacgagaccgtcatccgcctgggg
caagcgaccacgaccgacgacgccgaaggcgaattgactggattctttgacctgtccgcc
atcagcaggcagatgatctgggaggcggcgaaaaaactgaccggccggatccagcaggtc
cccagcgcctattcggccatcaaagtcaatgggcggcggtcctatgacctggctcggcag
ggggaggaagtccatctgcccgcgcggccggtgaccatcgaggaattcaccatcctgtcc
gtggacgaggcccaggccggtgccactcccgtgcttgacgtccatgcccgggtgacctgc
tcatccggcacttacatccgttctttagggcgggatctgggctcacttctgggcgtcggc
gcccatctgatcatgctccgccggctgcgggtggggaaattcggcctgacttccgccgcc
atcgcgaccgtgggggagcatcggttcgtgaacaggaggggggaggaaatctgtcggccg
gaggtggtcttcgacccgcctgtcgtcaaagaccccgccgccttttgtctgagcccggcc
caggccgccagcctgaccatgccggtcgttcccatcagcgaagaggagaaggtggccctt
tcccacggaatcgccctccccatccccgtgaccgggctgaccgccgcgatcacggccacg
gatcatgagctggtggctcttctggaaccatggaaacatcatcaagccaagcccgccacc
gtcttcctccccgcccagtag
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