Penicillium digitatum: PDIP_00300
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Entry
PDIP_00300 CDS
T04849
Name
(RefSeq) Protein transport membrane glycoprotein Sec20, putative
KO
K10755
replication factor C subunit 2/4
Organism
pdp
Penicillium digitatum
Pathway
pdp03030
DNA replication
pdp03410
Base excision repair
pdp03420
Nucleotide excision repair
pdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDIP_00300
03410 Base excision repair
PDIP_00300
03420 Nucleotide excision repair
PDIP_00300
03430 Mismatch repair
PDIP_00300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_00300
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_00300
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_00300
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PDIP_00300
DNA Replication Termination Factors
ELG1-RFC complex
PDIP_00300
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PDIP_00300
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PDIP_00300
Check point factors
HRAD17(Rad24)-RFC complex
PDIP_00300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Sec20
Rad17
DNA_pol3_delta2
AAA_lid_RFC1
RuvB_N
AAA_11
AAA_22
RCF1-5-like_lid
Mg_chelatase
SLFN-g3_helicase
AAA_assoc_2
AAA_16
AAA_19
AAA_5
AAA_24
AAA_7
AAA_28
Motif
Other DBs
NCBI-GeneID:
26228353
NCBI-ProteinID:
XP_014538779
UniProt:
K9HAN0
A0A7T6XV90
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MSPMTALQGRVKELSTSLGQLQPLVDRLHDFTASSLGQIQPLVDRLRDFTASMGQGDEAR
LELGSEIHSRLKEAEQELELLRVEVEALENGSDSKRKISAVHGQKDAERERVISMAGRLA
EDLKRTRREFRTAQLQAKRNAELAKRKERELLLSRSHSSEKKQPTEKFTQDDLVLNASND
VTSALRRTHQLMQAELSRSQFAQSTLEQSTAAISSLSESYSSLDTLLSSSRSLANSLLRS
QKSDTWYLETAFYVLLGTIGWLLFRRVFYGPIWWLVWLPLQLIARVAFVTLGAAGLSNTA
LQSASQSIPAGVSTAIHQMATAATTATVTASVTAWEQEPSVPIDSDRVIDKIGDMVEDEK
QKSVDIDNVTPEERARQAELPRNAKKRMFEAGMEDPARAAAAAASSSSKLKAGDNKEDST
RLQPWVEKYRPKTLDDVAAQDHTTKVLRRTLQASNLPHMLFYGPPGTGKTSTILALAKSL
FGPALYRSRILELNASDERGIGIVRDKVKNFARAQLSQPTGLDAAYRAQYPCPPFKIIIL
DEADSMTQDAQSALRRTMETYSRITRFCLVCNYVTRIIEPLASRCSKFRFKMLDNNAAGD
RISNIAAQEGLRLEDGVVDTLIRCGEGDLRRAITYLQSAARLVGATKPPTGKDADDDAVM
TDAGSNSSVITVRTIEEIAGVLPEEILDSLVEAMQPKSGGSVYEAISGVITDLVADGWSA
TQLVGQLYRRVVFNEAIPDIQKNKIVMLFSEMDKRLVDGSDEHLSMLDLSLRIAGVLRGN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccatgacagctctccagggccgcgtgaaagagctctcgacttccctaggacaa
ttacaacccctcgtggatcgactgcatgacttcactgcttcttccctgggacaaatccag
cccctcgtggatcgattgcgcgattttactgcttctatggggcagggtgatgaagctcgc
ctggaacttggaagtgagatacattctcggctgaaggaagccgagcaagagctagagctg
ttgcgtgtggaggttgaagcgcttgaaaatggttcggatagcaagcgcaagatatctgct
gtccatggacagaaggatgctgagagggagcgggttatttctatggcggggcgattagct
gaggatctcaagagaacacgacgtgaatttcgaactgctcagttacaagcgaagcgaaac
gccgaactcgccaagcggaaggagagagagttgctattgtcaagatcacactcttcggaa
aagaagcagccgacagagaaattcactcaggatgatcttgttctaaacgcttcgaacgac
gtgacatctgcgctacgcagaacacatcaactcatgcaggcggagctctcccgcagccag
tttgcccaatcgactcttgaacaatctaccgccgcaatctcatctctgtccgagtcctat
agcagccttgacacacttctctcttcatcccgcagtctcgccaactctctcctccgctcc
caaaagtccgacacgtggtatcttgagactgctttctatgttctccttgggacaattggc
tggcttctcttccgacgtgtcttctacgggcccatttggtggcttgtgtggctacctttg
caactcatcgctcgggttgcgtttgtaactctaggtgcagcagggctgtctaatacagct
ttgcagtctgcttctcagtcaattccggctggtgtctctacggctattcatcaaatggcc
acggcggctacaacagcaaccgtgacagcaagtgtcactgcctgggagcaagagccgtca
gtaccaatcgacagcgatcgcgtaatcgacaaaatcggtgacatggttgaggacgagaaa
caaaagagcgtagacattgacaatgttacaccggaggagagggccagacaagcagagctt
ccccggaatgccaaaaagaggatgtttgaagccggaatggaggatccggctcgtgccgct
gccgctgccgcatccagcagctctaagcttaaggctggcgacaacaaggaagattctact
cggctccaaccctgggttgagaaatatcgccccaagaccctggatgatgtcgctgcgcaa
gaccacacgaccaaagtcttgcgacgcactctgcaagcttcgaatcttccccacatgctc
ttctacggaccccccggcacaggaaaaacatccacaatcctcgctctcgccaaatccctc
ttcgggccagccctttaccgctcccgaattttagagctgaacgcctccgacgagcgcggt
atcggcatcgtccgcgacaaagtgaagaatttcgcccgagcccagctctcccagccaaca
ggcctagatgctgcctatcgcgcacagtacccatgcccaccgttcaagatcatcatcctc
gacgaggccgacagcatgacgcaagacgcacagtccgctctgcgccgcacgatggagaca
tatagtcggatcacgcggttttgtctcgtttgcaactatgtcacacgcatcatcgagccg
cttgctagtagatgcagcaagttccgatttaagatgctggataataacgctgctggtgac
cggatctcaaatatcgcggcgcaggagggcttgcggctggaggatggagttgtcgatacg
cttatccgatgtggggagggtgatttacgtcgagctatcacgtatctgcagagtgcggca
cgcttggtcggtgccacgaagccaccgactgggaaggatgctgacgatgatgccgtgatg
acggatgctggtagcaactctagtgtgataacggttcgcaccattgaagaaattgctggt
gtgctgccagaggaaattttggattctcttgtggaggctatgcagcccaagagtggcggg
tcggtctacgaggccatctcgggggtgattaccgatcttgtggctgatggctggagtgct
acgcagcttgttggacagttatatcgacgtgtagtgttcaacgaagcaatccccgatatc
cagaaaaacaagattgtcatgctcttctcagagatggacaagcggctagttgacgggtcc
gatgagcatctctccatgttggacctatcattgcgcattgctggagtccttcgtgggaat
tga
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integrated database retrieval system
