Penicillium digitatum: PDIP_00990
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Entry
PDIP_00990 CDS
T04849
Name
(RefSeq) RNA processing protein Emg1, putative
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_00990
Enzymes [BR:
pdp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
PDIP_00990
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
Other 90S particles
PDIP_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
26228422
NCBI-ProteinID:
XP_014538848
UniProt:
K9GM88
A0A7T6XV40
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MSDQEQAAGKRKRARTQSCPPPELPQLVAEQHMPIPSHDKDTQRLIVVLSNASLETYKAV
SSGRSGTKDEKFSLLNSDEHIGIMRKMNRDISEARPDITHQCLLTLLDSPVNKAGRLQIY
IHTAKGVLIEVNPSVRIPRTFKRFAGLMVQLLHRLSIRSTNSQEKLLKVIKNPITDHLPP
NCRKVTMSFEAPVVRTKDYLESLNPNESVAIFVGAMAKGHDDFADSFKDETISISNYSLS
ASVACSKFCHAAEEVWDIL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccaagaacaagctgctggcaagagaaagcgtgcgaggacccagtcatgccct
cctccagagcttccccagctggtcgccgaacagcacatgccaattccatctcatgacaag
gacactcaacgcttgattgtagttctttccaatgccagtctggaaacctacaaggctgtc
tccagtggacgctcggggaccaaagatgagaaattctctctgttgaacagcgatgagcac
attggtatcatgcgcaaaatgaaccgcgatattagtgaagctcgaccagatattacccac
cagtgtttactcactctcctcgattcccccgtgaacaaggccggtcggctccaaatttac
attcacaccgccaagggtgtcttgatcgaagtcaatccttccgtccgcatcccgagaacc
ttcaagcggttcgccggtctgatggtccagttgctccaccgactctccatccgttcgacc
aactcgcaggaaaagctccttaaggttattaagaatccaatcaccgaccacctgcccccc
aactgccgcaaagtgaccatgagtttcgaggcgcccgtggtccgcaccaaggactatctc
gagtcgctgaaccccaacgagagtgtcgccatcttcgttggtgctatggccaagggccac
gacgactttgccgattccttcaaggacgaaacaatcagtatcagcaactacagtcttagt
gccagtgttgcctgcagcaaattctgccacgctgccgaagaggtctgggatattctctga
DBGET
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