Penicillium digitatum: PDIP_01110
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Entry
PDIP_01110 CDS
T04849
Name
(RefSeq) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_01110
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_01110
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PDIP_01110
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PDIP_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
Spt6_S1
YqgF
Tex_central_region
SPT6_acidic
HHH_9
HHH_3
ARM_ECM29_C
B12-binding
Motif
Other DBs
NCBI-GeneID:
26228434
NCBI-ProteinID:
XP_014538860
UniProt:
K9GM36
A0A7T6XVA2
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MSLRDLIEGEAIMDDDDEEVADDYDAEGREGAGTTNHYNDSSEEEDEEEDDEEAARAVRE
GFIVDEDEEDERAARKHRKRPRAAREEEHLDEEDLELIGHGPSQHRGPATESKFKRLKRG
KDRESHQLSHGVDDIFNSDEEEEAQQYARPGQRRGLRDEMDDFIEEDTFSDDEAQRERDD
LGVAPASRVNKTGLIPTDTSGLDENALEDMRAAFGDGTEYDFALQMEDQEDADKQTEERH
LDLKDVFEPSELAERMLTEDDNEIRLLDEPERHQVARKPYKHVTLTEDQFREEAVWISNL
MLLKKRVDPELRDPFQRSVAKMLEFLITDDWEVPFIFQHRKDYMIHAVKDMANGADPDDN
SAQYNIRAEKLLNMTDLWDIFDHDLKFRALVDKRGTIQKTYDNLQSLFNVNDSNVEDQLV
AAATMEELQDVQDYLHFEYSSQLRDLNQVNGEATGETQRRKATGRSFFERVRNGKAYGFV
RAFGITADAFAQNASKEGRRQYTEDPTQQPEELADQFVDNDFSNSSHVLKAAKSMFAEEL
AVSPKMRKVIRQAYYMNGVVDCFRTEKGLRRIDEQHPYAEFKYLRNQQLSDIARRPEMFL
RMLKAEEEGLVDVRVRFENFDQFRKRLYADIESDNYSELADAWNRIRREVLDLALGKLEK
LINRSVKENIRQECENHVAKECREAFSQRLDQAPYKPKGMVLGTVPRVLTLSTGSGQVGR
DPIHWAYTEEDGRVLENGKFIDLSVGDESRDIADGENLAAFVDLVDRRRPDVIGVSGMTP
ETRRLYKLLSEIVDQKDLRGASYTNEHDEEISDPLEVVIVNDEVARLYHNSPRARSDNPG
FGPLTHYCVALGRYLQSPLKEYASLGRDVVSIQFKPGQQLVSQDLLLKQLETALVDMVNL
VGVDLNEAVADTATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNATYPAMG
VKVWNNCASFVYIDFENADPDADPLDNTRVHPEDYDIARKMAADALELDEEDIKAETDEN
GTGAIMRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYEELRKHY
VFLGTDDIFTMLTGETPDSLTPGMVVPIAIKRVFEDHIEAKLDCGVDVLVAETELGVPYD
IPVRNAYQVHQTVPAKILFLNRKGFSCNVSLREDQVSHPSRRNQDHGFGDWDEQQEREDK
ESLQEKTQRGGQAMRVIKHPLFRPFNSTQAEEFLGSQGPGDVVIRPSSRGHDHLAVTWKV
AQGVYQHIDVLELDKENEFSVGRVLKVGGRYTYSDLDDLIVNHVNAMAKKVSEMILHEKF
QEGSKTETDQWLETYTKANPRRSAYAFCINAKYPGYFYLCFKAGEHSRLQNWPVKVIPQG
YELQKNPYPDMHALCNGFKLMFSNMSKGGRR
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcgcgacctgatcgagggtgaggcgatcatggatgacgacgatgaggaagtc
gccgatgactatgatgccgagggccgcgagggtgcaggtaccaccaaccactacaatgac
tcgagcgaggaggaagacgaagaagaagatgacgaggaggctgctcgcgcggtccgtgaa
ggcttcattgttgatgaggacgaggaagacgaacgcgccgcccgcaaacacaggaaacgt
ccacgcgctgctcgcgaagaagagcacctggatgaggaagatttggaactcattggacat
ggtccaagtcagcatcgtggaccagccaccgaatcaaagttcaagcgcttgaagcgaggc
aaggaccgcgagagccaccagctttctcacggcgtcgatgatattttcaactcagacgaa
gaggaggaagcacaacaatatgctcgaccaggccagcgccgtggtctgcgcgatgagatg
gacgactttattgaagaggataccttctccgatgatgaggcacagcgcgaacgggatgac
cttggcgttgcgcctgcctccagagtcaacaagaccggcttgattccgactgatacctcg
ggcttggatgaaaatgcacttgaggatatgcgcgctgcattcggtgatggcacagagtac
gatttcgcactgcaaatggaagaccaagaggacgccgacaaacaaaccgaagaacgtcac
ctagacttgaaggatgtctttgaaccatctgagctggccgagaggatgttgacagaggat
gataatgaaattcgtcttttagatgaacctgaacgccatcaagttgctcgcaagccctac
aagcatgtgacattgaccgaggatcaattccgggaggaggcagtctggatctcaaacttg
atgttgctcaagaagcgcgtggaccctgaattgcgcgatcctttccagcgttctgtcgct
aagatgttggaatttctgatcacagacgattgggaagtgcccttcattttccagcatcgc
aaagactacatgattcatgctgtcaaagatatggccaatggcgccgatcccgacgacaac
tccgctcagtacaacatccgcgccgagaagctcctcaacatgaccgatctatgggatata
ttcgaccatgatctcaaatttcgcgctttggtcgacaagcgcggtacgattcaaaagaca
tacgacaacctgcaaagtctcttcaacgtgaatgattccaacgtcgaggatcagcttgtt
gcggccgcgaccatggaggaactccaagatgtgcaagattatctccatttcgagtactcc
tcacagctacgtgatctcaatcaggtcaatggcgaggctactggagaaactcaacgtcga
aaagccactggtagatctttctttgagcgggttcgaaacggcaaagcctatggcttcgtg
cgtgcttttggcatcactgcagatgcgtttgctcagaacgcctccaaagaaggtcgtcgg
caatacaccgaagatccgactcagcagcccgaagagttggctgatcagtttgtcgacaac
gacttttcaaacagttcgcatgttcttaaagccgctaagtcgatgttcgccgaagagctt
gctgtcagccctaaaatgcgcaaggtgatccgtcaggcatactacatgaacggagttgtc
gattgcttccgcacagaaaaaggacttcgccggatcgatgagcagcatccgtacgccgag
ttcaaatatctgcggaaccagcagttaagtgacattgcccgtcgcccagagatgttctta
cgcatgctcaaggccgaggaagaaggtctcgttgatgtgcgggtgcgatttgaaaacttt
gaccagttccgcaaacgcctttacgccgatattgagtcagacaactacagtgagcttgct
gatgcttggaatcgtattcgccgtgaggtgctggatctggccctgggcaaattggaaaag
ttgatcaaccgcagtgtaaaggaaaacattcgacaggaatgtgagaaccatgtggccaaa
gagtgccgcgaagcgttctcgcaacgtctcgaccaggccccttacaaacccaagggcatg
gtcctgggcacagtgccccgtgttctcactctctccaccggatctggtcaggtgggccgg
gaccccattcactgggcttacacagaagaagatggccgtgtcctggagaatggcaaattc
attgatctttcagtgggagatgaaagccgtgacattgcagacggtgagaacctggccgct
tttgtagatctggtggatcgtcgtcgaccagatgtcatcggtgtttcgggcatgacgcca
gagacgcgccgcctatacaagcttctatccgaaatcgtcgaccagaaagacctacgtggt
gcatcctacacaaatgagcatgatgaggagatcagcgaccccttggaggtggtaattgtc
aatgatgaggttgcccggctgtaccacaacagccctcgcgctagaagcgacaacccaggc
tttggacctttgacccattattgtgtggctctaggccggtacttgcagagcccgctcaag
gaatatgcgtccctgggccgtgacgtagtatccatccagttcaaaccaggccagcaacta
gtctcccaggacctgcttcttaagcagctggaaactgctttggtggacatggtcaacttg
gttggcgttgatctcaatgaggcagtagctgacacggcaacagccaatctcttgccgtat
gtctgcggccttggtccccgaaaggcggctcacttgctcaagattgtcaatatgaacggc
ggagtcgtcaataaccgagtggaactgcttggtgtcaacgcgacatacccggccatgggt
gtcaaggtttggaacaactgtgctagtttcgtctatatcgacttcgagaatgctgatccc
gatgctgatcctctggacaacacccgtgtgcatcccgaagactacgatattgcgcgcaag
atggctgctgatgcactggagttggacgaggaagacatcaaggctgagactgacgagaac
ggcactggtgctattatgcggaagctattccgagaagaggcacaggaccgtgtcaacgat
cttattctagaggagtatgcagagcagctcgagaaaaacctcaaccagcgcaagcgtgcc
accctagagactatccgagccgagttgcaacaaccctacgaggaattgcgcaagcattat
gtcttcctcggaaccgacgatattttcacaatgctcactggtgagacgcccgactcttta
acacctggtatggttgtgcccattgccatcaagagggtatttgaggatcacattgaggcc
aagttggattgcggggttgatgtgcttgtggccgagaccgaactcggtgttccctacgac
atccctgtacgcaacgcataccaagttcaccagacagtcccggccaaaattctgttcttg
aatcgcaagggtttctcttgcaatgtctctctacgtgaggatcaagtcagtcacccatct
cgtcgaaaccaggatcatggcttcggtgattgggacgagcagcaggagagagaggataag
gagtcgctgcaagagaagacgcagcgtggcggccaagccatgcgtgtcatcaagcacccg
cttttccggccgttcaactccacccaggccgaagagttccttggctctcaaggcccaggc
gacgttgttattcgcccatcgtcccgaggccacgatcacctagctgtcacttggaaggtg
gcgcaaggtgtgtaccagcacattgatgttctcgagctggacaaagagaacgagttctct
gtcggccgtgtccttaaggtcggtggtcggtacacttacagcgacctggatgatctgatc
gtcaatcacgtcaacgcaatggccaagaaggtcagcgagatgatcctacacgagaaattc
caagagggcagcaagaccgagacagatcaatggctcgagacttacaccaaggccaaccct
cgccgctctgcatatgcattttgcatcaatgccaaataccccggttacttttacctttgc
ttcaaggcaggcgaacattcgcgacttcagaactggccggttaaggtgattccacagggc
tacgaactgcagaaaaacccctacccggacatgcatgctctgtgcaacggctttaagctg
atgttcagcaacatgagcaagggcggccggagatga
DBGET
integrated database retrieval system
