Penicillium digitatum: PDIP_03560
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Entry
PDIP_03560 CDS
T04849
Name
(RefSeq) Transcription initiation factor iif, beta subunit
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
pdp
Penicillium digitatum
Pathway
pdp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PDIP_03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_03560
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PDIP_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Tau95
Motif
Other DBs
NCBI-GeneID:
26228679
NCBI-ProteinID:
XP_014539105
UniProt:
K9GKE1
A0A7T6XUL8
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MAQVKQDPDRPYFKQDPDSKDIALGDIDEEDLYEDAGDLDFTQAGQNVWLSRLPRSLWEH
WAHLDDDEEIEVGIMRVEGTPNNIKRVSLRLHDRPDNREIPKDYTLQRQTVDPSGTGSHL
THNTYLFTEKDIPGVENRMATFGETRSVLYEAQKREAKRREQGKRWEPYVRKTIPKHTAL
AGAVSEEFNCLPVENEEFRRISEKRALEALKPRKETVFIDKIPGKIIQARHALPTERGQF
VQATRPSKGKAQENKSTRMPQNELLDLIFQCFREFKYWPFKTLKARLAQPEAYLKQTLEM
VAHLVKAGDFAMTWELKPEATHSQYSNAMDNAKAELPPGVDDLESEDDPASGMDQDDVKF
EDV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtcaagcaagaccctgatcgcccgtacttcaagcaagaccccgacagcaag
gatattgcccttggggatatagatgaagaagatctctacgaagatgctggggacttggac
tttacacaggcaggtcagaacgtatggctttcccgtctgcctcgatcgctttgggagcac
tgggcccacctggacgatgacgaagagattgaggttggtatcatgagagtggaggggaca
ccgaacaacatcaagagggtcagtttgcgcctacatgatcgcccagataatcgagaaatt
cccaaggactacactctccagcgtcaaacggtcgatccatcaggcaccggatcacacctc
acccacaatacgtacctcttcaccgagaaggatattcccggtgtcgagaaccgcatggcg
acatttggagaaacgcgctcggttttgtacgaagcccagaaacgtgaagcgaagcggcga
gaacagggaaaaagatgggagccctatgtgcgaaagacgatacctaaacacactgccctc
gctggcgcggtcagtgaagaattcaattgccttcccgtagagaacgaagagttccgacgg
atctccgagaagcgagcgctggaagcccttaaacctcgaaaggaaactgtcttcattgat
aagattcccgggaagattatccaggcgcgtcatgctcttcccaccgagagaggacaattt
gtgcaagccacgcgaccttccaaaggaaaagcccaagagaacaaatccacccgcatgccg
cagaacgagcttctggatcttatcttccagtgcttccgcgaattcaaatactggcccttt
aagacacttaaggcccgattggcacagccagaggcctatctcaagcagactttggaaatg
gttgcgcaccttgtcaaggctggtgatttcgctatgacttgggaactgaagcccgaggca
acccacagccaatactcaaatgcgatggacaatgcaaaggcagagttgccaccaggagtt
gatgatcttgagtccgaggatgatccagcgtctggaatggatcaggatgatgttaaattt
gaggacgtctaa
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