Penicillium digitatum: PDIP_06420
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Entry
PDIP_06420 CDS
T04849
Name
(RefSeq) DEAD/DEAH box RNA helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdp03041
]
PDIP_06420
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_06420
Spliceosome [BR:
pdp03041
]
Complex A
U2 snRNP components
U2 related factors
PDIP_06420
Complex B
PDIP_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
Motif
Other DBs
NCBI-GeneID:
26228965
NCBI-ProteinID:
XP_014538655
UniProt:
K9H3K0
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MIAMTELGGMMGAVTADPAAQRRDDSRDRDRRRIDDSADLKPKSRRDDSRDRAPSRRSRS
RTREPSKPSTAAPTAQTDEQKKSERLAKLEAWKQKQAAEREKKQQEQSSVDPKKILEEID
RKSIGSQGPASFPGKLKFDPKAIVKSSTATTATSAVLGTDVAVPASVKAPSLTKSTTPSA
APSTPSGPLKAKGNVSGFGLGTRQVAETEKPSAFETLGFGDADEKSTRKKLEKLPTTPLE
VGGQVDDAVEEDDVDMQVEGTQEHAAAEARAASERRDTRLQNQTDDVHMEETTSAQADST
PMDVDDAEEIDPLDAFMAELQDSTPPERTIGATFAKKTTHQRPEAMFGDDEDVDVTAVGD
EKAEDVLALAAIKKKKREMPDIDHTKIDYEPFRKEFYTEPSNLAEMTEEEVANLRLELDG
IKVRGRDVPKPVQKWSQCGLGVQTLDVVHKLGWENLTSIQAQAIPTIMSGRDVIGVAKTG
SGKTGAFLVPMFRHIKDQRPLASTDGPIGMILSPTRELATQIHKDCKPFLKALGLRAVCA
YGGAPIKDQIAELKRGAEIIVCTAGRLIDLLAANQGRVLNLRRITYVVLDEGDRMFDMGF
GPQVVKIMASIRPDRQTVLFSATFPKSMEALARKTLNEPVEITVGGKSVVAPEITQIVEV
RNNDQKFFRLLELLGNLYEDDANEDYRTLIFVDRQEAADDLLKQLMYKGYPCMSIHGGKD
QIDRDSTIQEFKAGIFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAG
NTGTAVTFVTEEQDRYALDIAKALRQSGQEVPEPLQKLVDGFNEKVKSGKEKNFSRHGFG
GKGLDRLNMERETARLRERKAYKTGDDMDDEEDKLETEQESDDRFNKALSAVRSAAEPPV
PAATASVSMPGVPKGVDLDGKIVVHRTERAPANVSKNPLDKVGSAVADIHARLSRAGVMR
SGVPIDNRGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEASGTSITTKGNFYAAGK
EPGPGELPKLYILVEGETEISVTTAIHELRRLLKDATLAASEGEARAPVGGRYNVL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctatgacagaactaggcgggatgatgggcgcagttaccgcagatcccgcagcc
cagaggcgagatgactcccgcgatcgggatcgcaggcggatagatgattctgctgacttg
aagcccaagtctagacgggatgacagccgtgatcgtgctccgagccgacggtccaggtca
agaactcgagagccatcaaagccgtccacggcggcccccactgcccaaacagacgagcaa
aagaaatcagagagacttgccaagcttgaagcatggaaacagaaacaagccgcggaacgc
gagaagaagcaacaagaacagtcatcagttgatcccaaaaagattctcgaggagattgac
cgcaaatcaattgggtctcaaggtcctgcctcatttcccggaaagttgaagtttgatcca
aaggccatcgtcaaatcatcaaccgcgaccacagctacttccgccgtgcttggtacagat
gttgccgtcccggcgtctgtcaaggctccatcattgacaaaatccactacacctagtgct
gcgccctctacgccctctggtcctttgaaagccaaaggtaatgtcagcggatttggcctg
ggcactagacaagttgctgaaacagagaaaccttctgcatttgaaactctgggctttggg
gatgcagatgagaaatcaacacgcaagaaacttgaaaaattgccgaccacgcctctcgag
gtgggtgggcaggtggacgatgccgtggaagaagacgatgtagacatgcaagttgaagga
acccaagaacacgcagcagccgaagcgcgtgctgcaagtgaacgacgagatacaagactc
cagaatcaaaccgatgatgtccatatggaggagacgaccagcgcacaggccgattctacc
cccatggacgttgacgatgccgaagaaattgatcccctggatgcattcatggctgaactc
caagactcgacgccgcctgaacggacaattggggccacgtttgccaagaagaccacacat
caacggcctgaggcgatgtttggcgacgatgaggatgtggatgtgactgcagttggtgac
gagaaagctgaagatgtactcgccctggcggcaataaaaaaaaagaagcgggagatgcct
gatatcgaccacacaaagatcgattatgagccattccgcaaggaattttacactgaaccg
tccaacctcgccgagatgaccgaggaggaggtagcaaacttgcgacttgaactggatggc
atcaaggtgcgcggtcgcgacgtccctaagcctgttcaaaagtggtcgcaatgcggtctg
ggagttcagacattagatgttgttcacaaactcgggtgggaaaacctcacatccattcaa
gcgcaagcaatccccacgattatgtccggtcgcgatgtcatcggcgtagcaaaaactggc
tcaggaaagaccggcgctttcctggttccgatgttccgacacatcaaagatcaacgaccc
ttggctagtacagacggccccatcggtatgatcctgtcacccacccgtgaactggccacc
caaattcataaagactgcaagcctttcttgaaggccttgggtctgcgtgctgtctgcgcg
tatggcggagccccgatcaaagaccaaattgccgagctgaaacgaggtgctgaaattatt
gtatgcacggctggtcgtctcatcgatctgctcgccgcaaatcaaggacgggtcctcaat
ctacgccgcatcacgtatgtcgttctcgacgagggggaccgcatgttcgatatgggcttt
ggaccacaagttgtgaagatcatggctagcatccgaccggacaggcagactgtccttttt
tcggccacattcccaaagagcatggaagcattggcccggaaaactttgaacgagccagtg
gagatcacagtaggtggcaagagtgttgtggctccagagatcacccaaattgttgaggtc
cgtaacaatgaccagaaattcttccgccttttggagctcctgggaaatctgtatgaagat
gacgcgaatgaagactatcgcacgttgattttcgtggaccgtcaagaggccgctgatgac
ttactcaagcaattgatgtacaaggggtatccgtgcatgtcgattcacggcggaaaagat
cagatcgatcgtgatagcaccattcaagaatttaaggcaggcattttccctatcctggtt
gcaacgtcagttgctgctcgtgggttggatgtcaagcagctcaagctcgttgtcaactat
gatgcacctaaccacctggaggattatgtccatcgtgccggccgcactggacgggctggc
aacactggaaccgccgtcacgttcgtcaccgaggaacaggataggtatgcgttggatatt
gcaaaggctctcaggcaaagtggacaggaagtccctgagcctctccaaaagctagttgat
gggttcaatgagaaggtcaagtctggtaaggaaaagaatttctcgcgccatggattcggg
ggtaaagggttggaccgtcttaatatggaacgtgaaactgcgcgacttcgtgagcggaaa
gcatacaaaactggcgatgacatggacgatgaggaagataaacttgagaccgagcaagag
tcagatgatcgattcaacaaggctctttcagctgtccgatctgctgctgagccccctgta
ccagcagctacagcttcagtctccatgccgggtgtgccgaaaggcgttgaccttgatggc
aagatcgttgtgcatcgtacagagagagcaccggcgaacgtatcaaagaacccgttggac
aaggtgggctctgccgttgcagatattcacgcacgtttgagccgcgcaggtgtgatgaga
tcgggtgtacctattgataaccgtgggcctgatgccggagcgttccatgcaacgctggaa
attaacgatttccctcaaaaagcacgttgggccgttacaaaccgcacgaacgtggccaag
atcctggaagcatccggaacctccatcaccacaaaaggcaatttctatgccgctgggaag
gaacctggccccggggaacttcccaagctgtacattctggtggagggtgagacggagatc
tcagtcaccaccgccatacacgagcttagacgcctgctaaaggacgctacactggcagcc
tcagagggtgaggcgcgcgcaccagtgggtggccgctacaatgttctttag
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integrated database retrieval system
