Penicillium digitatum: PDIP_07050
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Entry
PDIP_07050 CDS
T04849
Name
(RefSeq) ATP dependent RNA helicase (Dbp5), putative
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
pdp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_07050
03015 mRNA surveillance pathway
PDIP_07050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_07050
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_07050
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PDIP_07050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
26229028
NCBI-ProteinID:
XP_014538090
UniProt:
K9H3D7
A0A7T6XV62
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MSDSQETTAAGSLADRITKPDESKPTDTSNVSTTPKEDGASAPAQGSAELEEPDYTVAVK
LSDLQADPNNPLYSVKSFEDLGLDARILKGLSTMNFRKPSKVQERALPLLMSNPPKNLVG
QSQSGTGKTAAFVLNVLSRLDLSTEQLQMTPQALILAPTRELARQIVGVIQIMGQFLEGL
VIGTAVPADSNARPSKMDCSVVVGTPGTVQDMIKKRIMNPTGLKVLVLDEADNMLDQQGL
GDQCIRAKAMIPRNVQIVLFSATFPAHVYRYAGKFAPAANEITLQHEELTVEGIKQLYMD
CSTDEEKYQNLVQLYGLLTVGSSIIFVRTRASAVEIEKRMVAEGHTVASLTGGVEGSQRD
AVIDSFRSGEAKVLITTNVLARGIDVSTVSLVVNYDIPEEYSSGQRTNTPDYQTYLHRIG
RTGRFGRIGVAISFVSNRNEWEMLRKIQEHFQCIIDRIDTSDWDEVEDMIKKTIKNTRAQ
ADFVRSN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagtcaagagaccactgctgcgggctccttggctgaccgtatcaccaaacct
gatgagtcgaagccaaccgatacctccaatgtctccaccactcctaaggaggacggagcc
tctgcccccgcgcagggctcggcagagctcgaagagcccgactacactgtcgctgtgaaa
ttaagtgatttacaagcggatccaaacaaccccctgtactcagtcaagagctttgaagat
ctgggccttgacgcgcgcattctgaaaggtctctcgaccatgaatttccgcaagccgtcc
aaggtccaagagcgcgctcttccccttttgatgagcaatcccccgaagaatttggttggt
cagtcgcagtccggtaccggcaaaactgcggccttcgtcctcaatgtcctcagtcgtctc
gacctctcaacggagcagttgcagatgacgcctcaagctctgatcctcgctcctacccgc
gaattggctcgccagattgtcggcgttatccagattatgggtcagttccttgaaggtctc
gtcatcggcactgctgttcctgccgattccaatgctcgcccatcgaagatggattgctcg
gttgtggttggcacacctggaactgttcaggatatgattaagaagcgtattatgaaccct
actggattgaaggtgcttgttctagatgaggcggataacatgcttgaccagcaaggcctg
ggagaccaatgtattcgggccaaggcgatgattcctcggaatgttcaaatcgtcctgttt
tccgcaaccttccccgctcacgtctaccgctatgcgggcaagtttgcccctgctgcaaac
gagattacactccaacacgaagagttgactgttgagggcatcaaacaactctacatggat
tgcagcactgacgaggagaaatatcaaaacctcgtccagctctatgggctgctcactgtc
ggatcctcaatcattttcgtccgaacccgtgcctctgccgttgagattgagaagcggatg
gttgccgagggccacactgtcgcctcgctgactggtggcgtcgagggatctcagcgtgac
gcggtgattgattccttccgcagcggcgaagccaaggttctgatcacgaccaacgttctt
gctcgtgggatcgatgtatctacagtctccttggtcgtaaactacgacatccccgaggaa
tattcttctggtcagcgcaccaacacacccgactaccagacctatttgcatcgcattggt
cgtactggtcgttttggtcgtattggcgttgcaatctcatttgtttccaaccgaaatgag
tgggaaatgcttcgcaagatccaagagcacttccagtgcatcatcgaccgcattgatacc
agcgactgggatgaagtggaggatatgatcaagaaaacgatcaagaatacccgagctcag
gccgactttgtccggagcaattaa
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