Penicillium digitatum: PDIP_07150
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Entry
PDIP_07150 CDS
T04849
Name
(RefSeq) Exosome complex subunit Rrp46, putative
KO
K12590
exosome complex component RRP46
Organism
pdp
Penicillium digitatum
Pathway
pdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PDIP_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_07150
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PDIP_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
26229038
NCBI-ProteinID:
XP_014538100
UniProt:
K9H3F6
A0A7T7BQ51
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MVGPIASLSQLNRADGSASYKCPATGYSILGAVNAPIELPARRDALKPEEATVEVFVKPG
TTTAGVGERYVEGILRSVLGKIVLGREKGFPRRGVVITLAIVGGENVERGDSYLTILPAL
LHAALLAMVSASVPLSMTLSATLLGVTKSGDIVRDPSPTAAKAAVSLHVFAFSSKNHLLL
NESEGRFEFDTWELVRERALLICQGVATASADGDVTMSEGTVSASLNSFIRETVEDRVYS
DYAYKLDSL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtccgatagcatccctctcacagctaaatcgtgccgacggttcagcgtcgtac
aaatgtccagctaccggttacagcattctgggcgcagtgaacgcgcccattgagctcccg
gcacgccgtgacgcattgaaacccgaagaagccaccgtggaagtctttgttaaaccaggt
acgaccactgctggcgtcggtgaaagatatgtcgaaggaatcctgcggtctgtgctgggg
aaaatagtcctcggacgggagaagggctttccccgtcgcggcgtggtcatcactttggct
attgttggaggagagaacgtggaacgcggtgactcgtaccttactatcctcccggctctc
ctccatgctgccttgctcgctatggtatctgcctccgttcctctatcgatgacgttgtcc
gcaaccctcctcggtgtaacgaagtctggtgatattgtgcgggatccttccccgactgcc
gccaaggctgctgtgtccctccacgtgtttgccttctcgtcgaagaatcaccttttgctc
aacgaaagcgagggtcgatttgaatttgatacctgggaactggttcgtgagcgcgcgctc
ttaatctgtcagggcgtggcaactgccagcgccgatggcgatgttaccatgagcgaagga
acggtcagcgccagtttgaatagtttcatccgggagactgtggaggacagggtctacagc
gactacgcctacaagctggattctctctga
DBGET
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