Penicillium digitatum: PDIP_07970
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Entry
PDIP_07970 CDS
T04849
Name
(RefSeq) CCR4-NOT transcription complex, subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pdp
Penicillium digitatum
Pathway
pdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PDIP_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_07970
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PDIP_07970
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PDIP_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
WKF
Flagellin_N
Viral_P18
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
26229120
NCBI-ProteinID:
XP_014538182
UniProt:
K9GKB3
A0A7T7BQ63
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MAARKTQQEIEKTFKKVSEGIQTFEGIYEKIRQATNPTQRDKLEDHLKREIKKLQRFRDQ
IKSWAAGNEVKDKAPLIEQRKAIEVCMEQFKAVEKEMKTKAYSKEGLSAASRLDPKEKER
VECCEFLSTMVDELQLKIEALEAEEETLHAQMKKGKKDTKKADRMADISHVTERHKWHVN
KLEFLNRSLQNGNVDVGAVQDLKESIKYYVEEGGSLDYSGEDETLYDDLNIGDEIEAQFG
MGGEGDRVSSQDAQSIQDEEPEPKPKVKQEAPAARRPSTQMKSPLPVLATLHPSASSSAT
PGMKPAPLPTRPPGETLKYASAAAAAAASDKSGVGILPLPPPPGFSPALSVALPIPKSST
ASPSVVSAQPVTKSIIPPLVAAVTEELAGPVRPKIPTSTTISSPAPTKVETSTNGKIETE
EIEADESVYHLPPGLQDLLQSFEVTKSRASANPSPSVQRLLATSLTTCPEAGDAEKPRHY
KPQNPYSTALYYPQEPLSIFDDPRLYDTGRIDTDTLFYLFYYRQGTYQQYLAAKALRNQS
WRFHKQYQTWFQRHEEPKNITEEFEQGTYRFFDYESTWSVKDSG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcgaaaaacgcagcaggagattgagaaaaccttcaagaaggtctccgaaggg
atacagacattcgaaggcatttacgagaagatccgccaggctacaaatcccacacaacgg
gataagctcgaagaccaccttaagcgcgagatcaagaagctccaaagattccgtgatcaa
atcaaatcatgggccgccggaaatgaggtcaaggataaagctcctctcatagagcagcgg
aaggccattgaagtgtgcatggaacaattcaaagccgtcgaaaaagagatgaagacgaag
gcctattcgaaagaaggtttatcggcagcttcacgactagacccaaaggagaaggagaga
gtcgagtgttgcgagttcctctccaccatggttgacgaacttcagctgaagattgaggcc
ctggaggcagaggaggaaacacttcatgcgcaaatgaagaaaggcaagaaggatacgaag
aaggcggatcgaatggctgacatctcccatgtgacggaacgacataaatggcacgtgaac
aagttggaattcctcaatcgttcattacagaacggcaatgtggacgtgggtgcggtacaa
gatctcaaagaaagtatcaaatattacgtcgaagaaggaggtagtcttgactactccggc
gaggatgagacactctacgatgatttaaatattggcgatgagatcgaggcacaattcggc
atgggcggcgaaggtgatcgagtatcgtcacaagatgctcaatcaatccaagatgaagag
ccagaaccgaagccaaaggtcaagcaagaagcgccagcagcccgaagaccgtccacacag
atgaaatcgccgttgcctgttcttgctaccctccacccgtctgcttcctcgagtgccact
ccgggcatgaagcccgctccccttccgacccgccctcctggtgaaaccctcaagtatgcc
tccgccgcagccgcagccgcagcaagtgacaaaagtggtgttggcattcttcctcttccc
cctccaccagggttcagcccggctttgtccgtggcgctgcctatccccaagtcttctact
gcttcccctagtgtggtatcagcacaaccggttaccaagtcaataatcccacctcttgta
gcagccgttacagaagagcttgctgggcccgtgcgaccgaagatccctacaagcacaact
atttcatcgccagcgcccacaaaagtggagacatcaacgaatggcaaaatagagactgaa
gaaattgaagctgatgaatcggtatatcatctgccccctggtctccaagacctgcttcaa
tcatttgaggtgacgaagtcgcgtgcgtcggccaatccatcgccgtctgtacagcgcctt
ctcgctacctcattgactacatgtccagaggctggcgatgctgaaaagccacgtcactac
aagccgcagaacccttatagcactgcactctactatccacaggaacccctttccatattc
gatgaccctcgattgtatgataccgggagaatcgacacggatactctcttctaccttttc
tactaccgtcaaggaacctaccagcaatacctcgccgccaaggcactccgaaaccagagt
tggcgcttccataagcagtatcaaacctggttccagcgtcacgaggagcccaagaacatc
accgaggagttcgaacaaggcacctatcgcttcttcgactacgaaagtacatggtcagtt
aaagattccggttga
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