Penicillium digitatum: PDIP_08600
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Entry
PDIP_08600 CDS
T04849
Name
(RefSeq) Translation repressor/antiviral protein Ski3, putative
KO
K12600
superkiller protein 3
Organism
pdp
Penicillium digitatum
Pathway
pdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PDIP_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_08600
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
PDIP_08600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_1
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_16
TPR_14
TPR_12
CFAP70_TPR_C
CFAP70_mid_TPR
ARM_TT21_5th
TPR_7
TPR_6
TPR_Slam
CABIN1_N
TPR_9
RMD1-3
ANAPC3
TPR_Psidin_N
TPR_MalT
HrpB1_HrpK
TPPII_C
ARM_TT21
RPN6_N
Motif
Other DBs
NCBI-GeneID:
26229183
NCBI-ProteinID:
XP_014538245
LinkDB
All DBs
Position
Unknown
AA seq
1451 aa
AA seq
DB search
MSSKAALKAVRAALESKDYQAAAEKAKEIVKNESTNYHANVFLGLASDRLNRNNDAENAY
SAATDINPNDKTAWQGLISLYEKQGGCNHDGYHKAVIALGKIFADNDEKERCQDLINKYT
KTMKNKGTSAQHKHALELQIPGSPLYDFLEGRLPRPSQTYQRLIEITERQEREFINREIG
ERRTRLGARIEQVTQEVRREAANKSRLDQFYQGMIDWTNDDTVRRQYEEKLFQRAYEELG
VLPDAEKEAKRAAVFKAAHDMVIIKHPFEPAWKVFLGWLDVQELSQYDVGHLREYIEFFP
ESGLSQVLKGFLLSELSPFPHDPSDETNGKDSNDSKETSATQPDNEIDDAKATPQDPLVL
MVEGLDSARDSILAHRIMADVYLSFEEYESVVNVARKGLLYIENLVRYSGIKIPNTVDAL
KNALANAMIHYQSPRHHTDAKRIFEGILERNPTSSNCLLGIGLILKEDQDYAEAVNFLRR
SLERDSANLKIRGELAWCEALSGDLEGGLKSLQATLEDLKEAQPDNREFKSELFYRIGYC
QWELDPSPAARKDRSGAYASLFASIQANMNFAPAYTILGFYYADYKKDKVRARRCFHKAF
ELSTSEIEAAERLAKGFADSKEWDLVEAIAQRVVDSGKARPSPGSKRRGFSWPYAALGSV
QVNKQQYSKSVVSFQAALRLAPTDYHSWVGLAESYHHSGRYNAATRAFEQAKSLEPELSA
KDKEHVWFARYMLANVRRELGQYDDAIAAYEDVLRSRPDDIGVTLALLQTLTESSAKSLG
LGLFNDAAELAYQAISVASSLVQIKSNIFNLWKAVGDAFSNFSYMKAKAGKLPASSCKAL
LAVDLDPMALDVMTDIDGVGTDWLAANESEELIPSELYVRLSIIAFKRALHVSVHDAHSQ
AVAWYNLGWAEYLTHRTVHPDTTKKGKKSRKFIKAAMRCFKRAIELEAGNADFWNSLGIV
TANMSPKVSQHAFVRSLHLNERNAQVWTNLGALYLLHGKGYQAYKTFLRAQATDPDYSLA
WVGQGFVSLDTRQTQEARGYFEHAFDISNSSDILTKRQFSLAHFDHLNEASSSNVSELIQ
PFFALHQLCIQDPSNLPFVHLSALLAERMGETADAESSLQVVCLGMEDEFEKTESPASLS
RYAQANADMARVLLARHSYEEAAEKAELALTLSGEEDAENFDPEACKKLRLSAHLTAGLA
FYNLKSMDQAIDMFRDALEEAQNAPDVVCLLAQVLWAKGGEENRSVAREQLLDCVMNHSS
HIGAVTLLGAIALLDADRDAIEAVESDLNSMISRNDIDLHDRAKIIKLLNAISAMGLNDN
ATVPESIRRIGDATAAVMLTPGQSAGWMELSAASRNPYPAAMAINRALQSVPPYSNLGAE
DLSEAYAQTGKVGDTFRAIMIAPWKSSGWEQLSHIVPIRNMWTRCTGQKSEEMDDEKPLL
PWKRSTGHGPE
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaagcggcattgaaagccgtgcgagcagctttggaatcgaaagattaccaa
gccgctgctgaaaaagccaaggagattgtcaagaatgagtccacaaattaccatgcgaat
gtctttctcggcctcgccagcgatcgattgaataggaacaatgacgctgagaatgcctat
tctgctgcgaccgatatcaatcccaacgataaaactgcgtggcagggcttgatctctctg
tacgagaagcagggtggctgtaaccacgatggttatcataaggcagtcattgctcttgga
aagatatttgccgacaacgacgagaaggaacgctgccaagatctgattaacaaatacacc
aagacgatgaagaataaggggacctcggctcaacacaagcatgcattggagctccagata
ccgggttcacctctgtacgacttccttgagggccggttgcctcgtccatcccaaacatac
cagcgattgattgaaatcaccgagcgccaggaaagagaatttatcaatcgtgagattgga
gagcgccgaacgcgtcttggtgctcgtatcgaacaagtaacccaggaagttcgccgggaa
gctgccaacaagagtcgtttggatcaattttaccaaggaatgattgattggaccaacgat
gatacggtacgccgccaatacgaggaaaaattatttcagcgtgcatatgaagagctcgga
gttctgcctgacgccgagaaggaggcgaagagagcggcagtttttaaggctgcacacgac
atggtgatcatcaaacatccgttcgagcccgcgtggaaggttttcctgggatggctggat
gtccaggaactttcccagtacgatgtggggcatttgcgcgagtacattgagttcttccca
gaatctggtctctcccaggttctcaaaggattcttgttgagcgaactatcgccatttccc
catgacccctcggacgaaactaacggcaaggatagtaatgatagcaaggaaacttcagct
actcagcccgataacgaaattgatgacgctaaagctactcctcaagaccctctcgtcctc
atggtcgagggcttagattccgctcgagattcaattcttgcccaccgcatcatggcagat
gtctacctctctttcgaagagtatgagagcgtggtcaatgttgctcgcaaggggttgctg
tacattgaaaatttggtaagatacagtgggatcaagatccccaacactgttgatgccctg
aaaaacgcacttgccaatgccatgatccattaccaatccccgcggcatcacacggatgcg
aaaagaatatttgagggtatcctcgaacggaacccaacctcctccaattgtctactcggg
atcggtttgattttaaaggaggatcaggactatgcagaagctgtcaacttcctgcggcga
tcccttgaacgcgattctgctaaccttaagattcgtggagagcttgcttggtgtgaggca
ttgagcggcgatcttgaaggtggcttaaagagtcttcaagctacgcttgaggacttgaaa
gaagctcaaccggacaacagagagttcaaatctgagcttttttaccgcattggttactgc
cagtgggagcttgatccgtccccagctgcgcgcaaagatcgcagtggtgcttatgctagt
ctctttgcttccatccaggcgaatatgaacttcgctccagcatacacgatccttggtttc
tactacgcagactacaagaaggataaggtcagagctcgtagatgcttccacaaagcattt
gaattgtcgacctctgagattgaagctgcagagcgtcttgccaagggctttgccgactcg
aaggaatgggaccttgtcgaagcaattgcgcagcgggtggttgactccggcaaggccagg
ccttcccctgggtcaaagcgccgagggttcagctggccatatgcggcactggggtcagtt
caagttaacaaacagcaatacagcaaaagtgttgtgtccttccaagcggcgcttcgactc
gctccaacagattaccactcttgggtcggtcttgccgaaagctatcaccactctggtcga
tacaacgccgccaccagggcctttgagcaagcgaaatcattggagccagagctttcagca
aaagacaaggaacatgtatggttcgcaaggtacatgctggcaaacgtcaggcgcgagctt
ggccagtacgacgacgccatcgctgcctacgaagatgtcctgagatcccggcctgatgat
attggtgtgactcttgcacttttgcagaccctgactgagagttcggcgaagagccttggt
ctgggtctcttcaatgatgcggcagagctcgcataccaagctatttcggtggccagctcg
ctggtgcagatcaaaagcaacatctttaacttgtggaaggctgtaggcgatgccttctcc
aatttttcatacatgaaggccaaggctggaaagctacctgcttccagctgcaaggctttg
ctggcagtcgatctcgatcctatggcccttgatgtcatgaccgatattgatggtgttgga
actgattggcttgcagccaatgaaagtgaagagttgattccatctgagctctacgttcgc
ctgtcaataattgcttttaagcgtgcactccacgtttccgtgcatgatgcccattctcaa
gcagttgcctggtacaaccttggctgggctgaatatttaacccatcgcactgtgcatcca
gacacgaccaagaaaggtaagaagtctcgcaagttcatcaaagcagccatgcggtgtttc
aagagagcgattgaattggaggccggcaatgctgatttctggaactcattgggtattgtc
accgcaaacatgagtcccaaagtctctcagcatgcctttgtacgaagcttgcatctaaat
gaacgcaacgcacaagtctggacaaaccttggagcactctacctcctccacggaaaaggc
taccaagcatacaagaccttcttgcgggcacaggccaccgacccagactattcactggct
tgggtcggccaaggcttcgtttcactcgatactcgccagacacaggaggcgaggggttat
ttcgagcatgcgtttgatatctcaaattcgtccgatattctcactaagcgccaattcagc
ctggcccactttgaccatcttaatgaggcctcctcctctaacgtctccgaactcattcaa
ccattttttgcattgcaccaactctgcatccaggatccgtcaaacttgccgtttgtgcac
ctttccgccctgttggcagagagaatgggcgagaccgcggatgccgagtctagcctgcag
gttgtctgtttaggcatggaagacgagttcgaaaagaccgagtcaccagcttccctttcg
aggtatgcccaagcaaacgcagatatggctcgtgtcctgcttgcacgccattcttatgaa
gaagccgcagagaaggctgagctcgcactcacactctctggggaggaagacgcggagaat
tttgaccccgaagcctgcaagaagcttcgtctatctgcgcatctgactgccggtctagca
ttttacaatctgaagtcgatggaccaagccattgacatgttccgcgacgctcttgaagaa
gcacagaatgctccagatgtcgtctgtcttcttgcccaggtcctgtgggccaagggtggc
gaggaaaaccggtctgttgctcgcgagcaactgctcgactgtgtgatgaatcactccagt
cacatcggagcagtcactcttttgggtgccatcgctctcctcgatgcggaccgggatgcc
attgaagcagttgaatcagaccttaacagcatgatatcgcgtaatgacatcgatcttcac
gacagagctaaaatcatcaaacttttgaatgccatctcagcaatgggacttaacgacaat
gcaaccgtccccgaaagcatcaggcgcattggcgatgccactgctgccgtgatgctcaca
cccggccaatctgctgggtggatggagttgtcggcagcgtcgcgaaatccatacccagcc
gctatggctatcaaccgcgctctacagagcgtgcctccttacagtaatctcggagctgag
gatctcagcgaagcctacgcgcaaactggcaaggttggtgacaccttccgagcgatcatg
attgccccgtggaaaagttctggatgggagcaactgagccacattgtacctatacggaac
atgtggacgcgctgcactggccaaaaatcggaggaaatggatgacgagaaacctctcctg
ccatggaagcgcagtacaggccatggaccggagtaa
DBGET
integrated database retrieval system
