Penicillium digitatum: PDIP_09090
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Entry
PDIP_09090 CDS
T04849
Name
(RefSeq) Ribosomal assembly complex component Ipi3, putative
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_09090
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
PDIP_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR55
Beta-prop_LRRK2
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Frtz
TMF_TATA_bd
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
26229232
NCBI-ProteinID:
XP_014538294
UniProt:
K9GIY1
A0A7T6XW66
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MLSESFVASTLSSAKSPTASLRDVGVCVHELQPSSILRSTFKKSSTLTNCLAVSPSHVFT
AQADKAVIHVYNREKGNQEGVVPFPERIRSIAVAGGKYGDVLVLGTEGGRLIVWETCTGR
QVATTASHLQPVTSLVVDPTSNFILSGSADASVHVWSLPGILSFSKPALSATRQPTNSPI
RTFSNHRAAITSLAVGHSNGRHNIVVSTAKDNTAIAWDYHTGRALRTFLLPLSATSVALD
PVDRAFYVGYEDGSVQSVDFYRSQSAQHPLHDPSVQSTPAQVSMEDRWLPPSAETGSVKT
ISPTYDGTTLLSGHANGKVLSWNVARRKYIASIADYTHPITNLVMLPPGGIPHPSSDLKR
KAHTIVKPRHDSGLSAPNHAPGAIPAEYMFHTQITAPPDSRKPTLFSQALTHSSFPSSMI
EDGLAELAAFRQSGNTEVTRVASSTGIARETAEDAAARDSQVTELENEVSMLKKKVAVNE
TARHNADDEVVQLRSELANLQDYINELHEKQEAAQQEKVLRQARKQEHETKKREAWLAAE
KKGRNGDAVVQKMDIDAAMTSDSDDQSDE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgaatctttcgtggcatcgacgctgtcatctgccaaatctccgactgcctca
ctcagagatgtaggcgtctgcgttcacgaattgcagccttcgtcgatactgcgatcgact
ttcaagaagagctcaactttaaccaattgtctggccgtcagcccctcgcatgtattcaca
gcccaggcagataaagctgtcattcatgtatacaaccgagagaagggtaaccaagagggt
gttgttccttttccagagcggatacgcagcattgctgtcgcggggggcaagtatggcgat
gtcttagttttgggcactgagggtggtcgattgattgtttgggaaacatgcacaggacgc
caagtagccacaaccgcatcccacctgcagccagtgacctcactcgtcgtcgaccccacg
tccaacttcattttgtctggctccgctgatgccagtgtacatgtctggtccttgcctgga
attctttcgttctcgaaacccgctctcagcgcgacacgccaacccacgaactcacctatc
cgaactttctccaatcaccgtgcagctatcacctcgcttgccgtaggacatagcaatggc
cgccacaatatcgtggtatcaaccgcaaaggacaacactgcgatcgcgtgggactatcat
accggccgtgctctgagaaccttcctccttcccttgtccgcaacatctgtggctctagac
ccggtcgaccgggctttctacgtggggtatgaggatggcagcgtgcaatcagtagacttc
taccggagccaatctgcgcagcatccccttcacgacccttcagtacaatcaacacccgcg
caggtgtccatggaggaccggtggctccctccctcggctgagacaggctcagtaaagaca
atctcccccacatatgatggcaccacgttactctcgggccacgcgaatggcaaagtactg
tcctggaatgtcgcacgacggaagtatatagcatcaattgccgactacacgcacccgatc
acgaacctggtcatgctacctccgggtggcatccctcacccttcctcggatttgaagaga
aaggctcacaccatcgtcaaaccgcgccatgatagtggcctttcggccccgaaccatgcc
cctggcgccatccccgcagaatatatgttccacactcagatcaccgcaccacctgactcc
cgcaaaccaactctattctctcaggcccttactcactcctcttttccctcttccatgatc
gaagatggtcttgcagagctcgcagcattccgccagtccggtaatacggaagttacccgt
gttgcctcaagcaccggcatcgctagggaaaccgcggaagacgcagctgcccgcgattcc
caggtcaccgagctcgaaaacgaggtgtctatgctcaagaaaaaggttgcggtgaatgag
actgctcgtcacaatgcggacgatgaggttgtacagctgcgctcggagctcgccaatctg
caggactatatcaatgagttgcatgagaagcaggaggccgcacagcaggagaaggtcctg
cggcaagcaaggaagcaggagcacgagacaaagaaacgggaagcttggcttgctgcagag
aagaagggtcgcaatggcgatgcagttgttcaaaagatggacattgatgctgctatgact
agtgactcagatgatcagagcgacgaataa
DBGET
integrated database retrieval system
