Penicillium digitatum: PDIP_09700
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Entry
PDIP_09700 CDS
T04849
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_09700
03041 Spliceosome [BR:
pdp03041
]
PDIP_09700
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_09700
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_09700
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PDIP_09700
mRNA cycle factors
Common to processing body (P body) and stress granule
PDIP_09700
Spliceosome [BR:
pdp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PDIP_09700
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PDIP_09700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
26229293
NCBI-ProteinID:
XP_014538355
UniProt:
K9GJM6
A0A7T7BQC4
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MESYDEPDAASAAGAASAVDSASAGEVASGKDLNIAEPPVRGVLSGVGPNPQAAQKIARE
KGWTDPVPFEYAELANSKDHRDWAGIAVRYEWKDEYGDVGPAVPELEDQLFHGELIARAG
AKLDELNSYKVNIESPNEIKAVTEWANFGLHPVMLENVRLCGYEQPTAVQSYAIPAVLAN
LDVIAVAQTGSGKTGAFLIPILSKLMGKARKLAAPRPNTTERFNPREDAVRAEPLVLIVC
PTRELATQIFDDARRLCYRSMLRPCVAYGGAPSSLQREELQKGCDILIATPGRLLDFMAQ
THVLSLRRVRYTVIDEADEMLEADWEEEFKKIMSGGDVNEDDDHRYLMFSATFNKDFRKL
AKQYLSQDHVRLRVGRAGSSHHNVVQDIIWVDKDKKMRAIYDLLISMPPVRTLIFVNSKE
QVDFVDDYLYNSGMPTTSIHSGRTQREREDAMRAFRSAKCPVMVATGVSARGLDVINVLH
VVNYDLPRAMHGGITEYVHRIGRTARIGNEGIATSFYNERDEDIAEDLVKILIECKQLVP
EFLKDFRPEGDVLEFDDDSDKEFFDNPSNAGSDAGFAAGSDAEVESEAGSAAAEPSDAED
ANTEPAEKNEPAVPKPIVPRPTATSEEEEASSWWKPASPLAERQKWREEEDKRQETKAGL
ASSHWAPRPPSPQDPDSFWM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttacgatgagcctgatgctgcatcggctgcaggcgctgcctcagccgttgac
tcggcctcagccggtgaagttgcttctggaaaggatctcaacattgcagagcctcctgtc
agaggcgttctttctggtgtcggccccaacccccaggccgctcaaaagattgctcgcgaa
aagggttggactgacccagtgcccttcgaatatgctgagcttgctaatagcaaggaccat
cgtgattgggctggaattgccgtccgttacgaatggaaggacgaatatggagatgttggt
cctgctgtccctgaattggaggaccagcttttccatggtgaactgattgcgcgtgctggg
gctaagctcgacgaactgaacagctacaaggtcaacatcgagagtcctaatgaaatcaag
gcggttacggagtgggcaaactttggtttgcatccagtcatgctggagaacgttcgtctc
tgcgggtacgaacaacccactgcggttcagtcatatgcaattccagctgttctggccaat
ttggatgttattgccgtggcccaaactggctctggaaagacgggagctttcctcattcca
attctttccaagttgatgggcaaagcgaggaagctggctgctcctcggcccaacaccaca
gaaagattcaacccaagagaggatgctgtgcgagcagagcctttggttctaattgtctgc
cccactcgggaattggcaactcaaatcttcgatgatgcgcgtcggttatgctatcgttcc
atgctgcgtccatgtgtcgcttatggcggtgctccttctagccttcaacgtgaagagctt
cagaagggatgcgacattctgattgccactccaggccgtcttcttgattttatggcacag
actcatgttctttcgctccgccgcgttcgatataccgtgattgacgaggcggatgaaatg
ctggaagctgactgggaggaagagttcaaaaaaatcatgtctggaggagatgtgaacgag
gatgatgatcatcgctacttgatgttctccgccaccttcaacaaggatttccggaaactt
gcaaagcagtatctcagccaggaccatgtgcgcctccgcgttggtcgagccggcagctcg
caccataacgttgtgcaggatattatttgggttgacaaagacaagaagatgcgcgcaatc
tatgatcttctgatcagcatgccgcctgttcgtaccttgattttcgtcaacagcaaggag
caggttgacttcgtcgatgattacctttacaactctggaatgcccaccacttctattcac
agtggaagaactcaacgtgagcgagaggacgctatgcgtgccttccggtccgcgaagtgt
ccagttatggttgctaccggcgtctccgctcgtggacttgatgttatcaatgtgctccac
gtcgtgaattacgatctccccagggcgatgcacgggggcatcactgaatacgttcaccgt
attggacgtactgctcgcattggaaacgaaggaatcgccacctctttctacaatgaacgt
gatgaggatattgccgaggatcttgtaaagatcttgatcgaatgcaagcaactggtcccg
gagttcctcaaagattttcgccctgagggcgatgtgctggaatttgacgatgactctgat
aaggagttctttgataacccatctaacgctggttctgacgctggctttgctgctggctct
gacgctgaggttgaatccgaagcaggatctgctgctgctgaacctagtgacgccgaggat
gcgaacacggagcctgccgaaaaaaacgagcccgctgttcccaagcccattgttcccaga
cccaccgctacatccgaggaggaggaggcttcttcatggtggaagcctgcctcgcccttg
gctgaacgccagaagtggagggaagaggaagataagcgccaggagaccaaggctggtctg
gcgagttctcactgggccccccggcccccttctccccaggatcccgattcgttctggatg
tag
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