Penicillium digitatum: PDIP_10450
Help
Entry
PDIP_10450 CDS
T04849
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_10450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_10450
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PDIP_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Utp12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
WDR54
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_RIG_1st
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Frtz
Utp13
Motif
Other DBs
NCBI-GeneID:
26229368
NCBI-ProteinID:
XP_014538430
UniProt:
K9GJ93
A0A7T6XVT7
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MVKSYFKFEHSNTFGLVASASSNAVWAKDDQTGIARQTGAGRAIVGASEEVLCWDVKKGE
LLGRWRDSACRAQVSVVTQSMTDEDIFAVGYEDGSIRLWDSRTATVIISFNGHKSAVTKL
AFDNAGVRLASGSKDTDIILWDLITETGLFRLRGHTDQITSLHFLFPSPELLTSSGLNEH
SGFLLTTGKDALIKVWDLSSQHCIETHVAQSNGECWSLGLSPDQGGCITAGNDGELRVWS
IDEAAMMEISKEKVGADGRRILNERGTFYRHGKDRTLGIRFHPRSDYVGFHGSDKSVEVW
RIRSQSEVQKSLARKKKRRKEKEARSEETGPEEDNDKSEDVSAAPVSEVFVQHVIVRTGG
KVRSFDWMTNKSSGLNLLAATTNNQLEAYSIVPANKKTADSEDPDYTRILAVDIPGHRTD
IRSIALSSDDRMLASASNGTLKIWNVRTESCLRTLECGYSLCSAFLPGDKIVVVGNKNGE
LEVFDIASSTLLDTIKAHDGPVWSLHVHPDGKSMVSGSADKTAKFWNFQVVQEEIPGTKR
TTPRLKLAHTRTLKVNDDILNLRFSPDARLLAVSLLDNTVKVFFVDSLKLFLNLYGHKLP
VLSMDISYDSKLIVTCSADKTVRLWGLDFGDCHKAFLAHEDSIMAVAFVPHNKDGNGHNF
FSASKDRIIKYWDGDKFEQIQRLVGHHGEIWALAMSHTGDFIVSASHDKSIRIWQQTDEP
LFLEEEREKEMEEAYDSTLTASLEQEEDGEDGEKAEAVDAGKQTTGTLMAGEKIMEALEL
GLEDLEVVRDWRKVKAANPNAAAPDRNPVYLALNNVSAEQHVLNTVQKIPAAALQDALLV
LPFSKLSALFTFLNIWADREWNVPLTCRVLFFILKTHHRQIVASKMMRPMLDSIRVSLRR
VLARQKDEMGFNLSALQFIGNQIREQSTTDYVDEDTWEEQQTSKGTGKKRQFVSVA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcatactttaaattcgagcactcgaatacattcgggctcgtcgcctcggcg
tcttcgaatgcggtttgggccaaagatgaccagaccggcattgcacgccagacgggcgct
ggacgtgccattgtcggcgcaagtgaggaagtgttgtgctgggatgttaagaagggagaa
cttcttggaagatggcgcgattctgcttgcagagcgcaggttagtgtggtcactcagagc
atgacagatgaagatatcttcgcagttggctacgaggatggaagtattcgtctttgggat
tcgcgcaccgccacggtcattatttccttcaacggtcacaaatccgccgtcactaagctg
gctttcgacaacgcaggcgtgcgcctggccagtggctcaaaagacaccgatatcatcctc
tgggatttgatcactgagaccggtcttttcagacttcgcggacacaccgatcaaatcaca
tcactacacttcctatttccctccccagaattactcacttcttctggattgaatgaacac
tcagggtttctcttgaccaccggaaaggatgcactgatcaaagtctgggatctttcctct
cagcactgcattgaaacacacgtggcacaatcaaatggcgagtgctggagcttgggcctt
tcgcctgatcagggcggatgtatcacagccggcaatgatggtgaactcagggtctggtcc
attgacgaggcggctatgatggagatttccaaggagaaggtgggcgcggatggtcgccga
attctcaacgaacgaggaactttctaccgacatggcaaggatcgcacacttggcatccga
ttccacccccgctcagattacgttggatttcacggttccgacaagtcggtcgaagtttgg
cgcattcgatctcagtcggaggtacaaaagagtttggcccggaagaagaagagaagaaag
gagaaggaggctcgctccgaggaaaccggaccggaagaggacaacgacaagtctgaggat
gtttccgctgctcctgtatctgaagtctttgtccagcacgtaattgtgcgaactggtgga
aaggttcgttcgtttgactggatgaccaacaagtcaagtggcttgaacctcctcgccgca
acaacaaacaaccagcttgaggcctacagcattgtgccagcgaacaagaagactgccgac
agcgaggatccagactacactcgaatcttggcagtggacattcctggtcaccgaacagat
atccggtcgatcgcattgagctccgacgaccgaatgcttgcctccgcttcgaatggcact
ctgaagatctggaacgttcgcaccgaaagctgcctacgaacacttgagtgtgggtattcc
ctgtgttctgcattccttcctggtgataagattgtcgttgttggcaacaagaacggagaa
ctggaggtgtttgatatcgcatcctcaactttgctcgacactattaaagcccacgacgga
cccgtgtggtcacttcatgtgcaccccgatggcaagtctatggtgagtggaagtgcagac
aagacagccaagttttggaatttccaggttgtccaggaggagatcccgggaaccaaacgt
accaccccccgcctcaagctggcacacacaaggacgctgaaggttaacgacgatatcttg
aaccttcgtttctctccggatgcacgacttttggctgtttctctcttagacaacaccgtg
aaggtcttcttcgtcgattcgctgaagctattcctgaacctttacggacacaaacttcct
gtcctgagcatggatatttcctatgatagcaaactaattgtcacttgctcggctgataag
actgttcgactctggggtttggattttggtgactgtcacaaggccttcttggcccacgag
gacagtatcatggcagtggcatttgttcctcacaacaaggatggaaacggtcacaacttt
ttcagtgcaagcaaggaccgtatcatcaaatattgggacggtgacaagttcgaacaaatc
cagcgcctcgttggccaccacggtgaaatctgggcacttgccatgagtcacacaggtgac
ttcattgtcagtgccagtcacgacaagagcatccgcatttggcaacaaaccgacgagccg
ttgttcctggaggaagagcgagagaaggagatggaagaggcttatgacagcacgctcact
gcatctctcgagcaggaggaagacggtgaagacggcgagaaggccgaggccgtcgatgcg
ggtaagcagacgactggcactctgatggcgggagaaaagatcatggaagctctggaacta
ggcctcgaggatcttgaagtcgtacgcgactggcgcaaggtcaaggctgccaaccccaac
gccgccgcgccagatcgtaaccccgtctatttagctctcaacaacgtctccgccgagcag
cacgttctgaacactgtccagaagatccccgcagctgcccttcaggacgcccttttggtt
ctgccattctctaaactctccgctctcttcaccttcctcaatatctgggccgatcgcgaa
tggaacgtgcccctcacctgccgtgtgttgttcttcatcctgaaaacccaccaccgccag
attgttgccagcaagatgatgcgtcctatgcttgacagcattcgggtatcgcttcgtcgg
gtccttgcccgtcagaaggacgaaatgggcttcaacctttctgcgctgcagttcattggc
aaccaaatccgcgaacaaagtaccacggactacgttgatgaggatacttgggaggagcaa
cagacctccaagggcactggcaagaagcgccagtttgtcagcgttgcctga
DBGET
integrated database retrieval system