KEGG   Penicillium digitatum: PDIP_10710
Entry
PDIP_10710        CDS       T04849                                 
Name
(RefSeq) Nuclear pore protein (SEH1), putative
  KO
K14299  nucleoporin SEH1
Organism
pdp  Penicillium digitatum
Pathway
pdp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PDIP_10710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdp03019]
    PDIP_10710
   04131 Membrane trafficking [BR:pdp04131]
    PDIP_10710
Messenger RNA biogenesis [BR:pdp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PDIP_10710
Membrane trafficking [BR:pdp04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    PDIP_10710
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_Aladin WD40_Gbeta Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 26229394
NCBI-ProteinID: XP_014538456
UniProt: K9GFY8 A0A7T6XVW0
LinkDB
Position
Unknown
AA seq 386 aa
MGAVEGPDITAGFADFDAGHRDLVTVTRFNFYGNRIITASSDHRMKVWDLKDGQWQLIDT
WRAHDAEIRDATWNGPFTGQHIGSVGEDMKLKIWQEDVTQPPNSGRRFKSVFRMTAPKRH
PFVSLDFRNIDLESWLAVITRDGYLMVMEPSNPDSLADWQPVDQFRVCTAPERGEETSFK
VQFHHDPADITHTISPDSDRKSLSLIVAVMDTVKIYRTDANRRFYHAIELNGHSGLVRDI
SWANGSVRGYDLIASGGKDGLVRIFEVYTTPVGQAPQTSSGQKAELRMQPQSPSPRAKSQ
SGIGSALASRVPASATDRQPSGDSQFRHSFKQVACIDSKHLDVWQVQFSFSGDSLISSGD
DGTVRFWKRSLSGEWLEFAETDMASQ
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgggggctgtggagggccccgatataacggctggattcgctgacttcgacgccggccat
cgggatctggtcactgtcaccagatttaacttctatggcaaccgtattatcaccgcttcc
tctgatcaccgcatgaaagtgtgggatctcaaggatggccaatggcaactgatagacacc
tggcgcgcgcacgatgctgagattcgcgatgccacatggaatggtccttttacaggccaa
catattggcagtgtcggagaggacatgaagttgaaaatctggcaggaagatgtaacccag
ccaccaaactcagggcggcgtttcaagtcagtctttcgtatgaccgcgccaaaaagacat
ccatttgtatcactcgactttcgcaacattgacctagagtcgtggttggccgtgataaca
cgggatggctacctcatggttatggaaccctccaatcccgacagccttgcagattggcag
cctgttgaccaattccgagtgtgcaccgccccggaacgcggtgaggagacaagtttcaaa
gttcagtttcatcatgaccctgccgacattactcataccatctcaccggattccgatcgg
aaaagtctgtcgctgattgtagctgtcatggacacagtcaagatctatcgcactgacgca
aaccgacgattctaccatgcaattgaactgaatgggcatagcggccttgtgagagatatc
tcctgggctaatggttctgtgcgcggctacgatcttattgcgagtggtggcaaagatggt
ttggtccgcatctttgaagtgtacacgacgccagttggccaagcaccacagacctctagt
ggccagaaggcggaacttcgcatgcagccccagtcaccgtcaccacgagcgaaatcgcag
tccgggattggctctgctctagcgagccgtgtgcctgcatcggcgactgatcgccagccc
agcggggattcacaatttcggcactcgttcaaacaggtagcttgtattgacagcaaacac
cttgatgtgtggcaagttcaattctcgttctctggggactcgttgatttcatctggtgac
gatggcacagttcggttctggaaaagatctttgtctggagagtggctcgagttcgccgaa
acagacatggcttctcagtga

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