Penicillium digitatum: PDIP_11430
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Entry
PDIP_11430 CDS
T04849
Name
(RefSeq) ATP dependent RNA helicase (Rok1), putative
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_11430
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_11430
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
Helicases
PDIP_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
26229466
NCBI-ProteinID:
XP_014538528
UniProt:
K9GFS9
A0A7T7BQJ1
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MDAFRLLTRSTKLKPASSASDSRLPSTGKAANPQLFRTVETDKLEFAKNGKKRKRGAAVQ
QAEEDVPDLDFFSSNKRTAASVTETAAATAATENDKKVSAQDAASDDDDSMDEVERRTIL
NSHKIKVTDLRDLEEIQVQPTSTKDSKKKKKKSKKEEAPILSKKEQKRARRLFPEPLLNF
KELRSKYRISSRLAENIAEQGFTVPTEVQLGTLPLLLGESSEPDLLVVAPTGSGKTLSFL
IPVINKIVRHHHSNPDEHGILSLVVAPTRELASQIVNEGRKLVAGTGVKITLMRKGMRVG
DVGAAGANVLEENSEESSGSEDDDTENKPAKQRTSVPVTKSDILVTTPLMLVNALSANRT
TTMATLPLVRSLVMDEADVLLDPLFREQTLEIWKSCSHPDLRVGLWSATMGSNIEDLTKS
TIKERLEDLERKPSKPHALLRLVVGLKDSAIPNIDHKLVYAATEQGKLMGLRQLLRPAAA
SASDVRLRPPFLIFTQTIPRAVALHSELKYDIPAEAGGSSRIAVLHSDLSDGQRSDIMRD
FRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGIAVTYY
TKEDIPYVKSIANIIDVSEKLRGGEEGDKSIQKWLLDALPNLSKNNKKDLKRHGVKARQA
PRLTDKEEDGKSARGMRISTKSGFERRMENNKRGAIEASRNRKAAAAASGNASDTGSWSG
LDD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgttcagattattgacccgttcaacaaagttaaagcccgcctcgtcggcttca
gactctcgtctgccctccactgggaaagcagccaatccgcagctcttccggaccgtggag
accgacaagctcgagtttgccaagaatggcaaaaaaagaaaaagaggcgctgccgtccag
caggctgaggaagatgtccctgatctcgactttttcagttcaaataagcgcactgcagca
agtgtgacggaaaccgctgctgcgactgctgcgaccgagaacgacaagaaagtgtctgct
caggatgccgcctctgatgacgacgattccatggatgaagtggagcgtcgcactatcttg
aactcacacaagatcaaggtgacagacctgcgcgacttggaagagatccaagtccagcct
acgtctaccaaagattccaagaagaaaaagaagaagtcaaagaaagaagaggcgccgatt
ctcagtaaaaaggaacagaagcgtgccagacgtttgttcccggagccactgcttaacttc
aaggagcttcggtctaaatataggatctcctcgcggctcgcagagaacattgcagagcaa
ggatttaccgtacctacagaggttcaacttggaaccctaccattgcttctgggagaatct
tctgagccagatcttctggttgttgcccccaccggtagcggcaagacactgtcattctta
atccctgtcatcaacaaaattgttcgacaccaccactcaaaccccgacgagcacggtatt
ttgtctctggttgtggcgcccacccgggagttggcaagtcaaattgtcaacgagggccgc
aagctagttgctggaactggcgtgaagatcacgttgatgagaaagggtatgcgcgttgga
gatgttggtgctgctggtgccaacgttcttgaagaaaacagcgaagaatcatctgggtcg
gaagatgatgataccgaaaacaagccagcaaagcagcgaaccagcgtcccggtcaccaag
agtgatattctcgtcactacgcctctgatgttggtcaatgctttatctgcgaatcggaca
accaccatggcaacattacctctcgtgcggagcttggttatggacgaagccgatgtcctc
ctggacccgttgttccgggaacagacacttgaaatctggaaatcatgctcacaccccgac
ttgcgtgtcggcctttggtcagctaccatgggatccaatatcgaggatctcacaaagtcg
accattaaagagcgactggaagatctcgaacgaaagccaagcaagccacatgcactactt
cgtctggttgtagggttgaaagactctgccatccccaacattgaccacaaacttgtgtac
gcagctacagaacagggcaaattgatgggacttcgccaacttcttcgccctgcagcagcc
tcggcatcagatgtccgtcttcgccctcccttcctcatttttacgcagaccatccctcgg
gcggtggcactacactccgaactcaaatatgatattccagccgaagccggcggatcctcc
cgtattgcggttctccactctgatctctcagatggccaacggtctgacatcatgcgcgac
ttccgcaaaggcgagatctggattttggttacaacggatctgctagcccgcggcgtcgac
ttccgcggtatcaacggcgtagtcaactacgatatccccaactcagccgccgtctacgtc
caccgcgtggggcgaaccggtcgtgctggtcgcgagggcggtatcgccgtcacttactat
accaaggaagacattccttatgtgaagagcattgccaacatcatcgacgtcagcgagaag
ctacgtggtggcgaagaaggcgacaaatccattcagaaatggctgctcgatgctttgccg
aacttgagcaagaacaacaagaaggatttgaagaggcatggtgttaaggcgcgccaggcc
ccaagattgaccgacaaggaggaggatggaaagagcgctcgtggtatgagaatcagtacc
aagagtggctttgaacgccgcatggagaacaacaaaaggggtgccatcgaggccagtcgc
aacaggaaggctgccgcagcggctagcggcaacgccagtgacactgggagctggagtgga
ttggatgattaa
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