Penicillium digitatum: PDIP_12390
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Entry
PDIP_12390 CDS
T04849
Name
(RefSeq) Small nucleolar ribonucleoprotein complex subunit, putative
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_12390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_12390
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PDIP_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Utp13
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_NWD2_C
WD40_2
Axin_b-cat_bind
Motif
Other DBs
NCBI-GeneID:
26229562
NCBI-ProteinID:
XP_014537852
UniProt:
K9GFH9
A0A7T6XP74
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MSKAIVKTTFEASRTLRPIYTGGSTALDASGRILLSCVGEDALIVDLETGNQLTSLEGDG
EIVTGLAITPSASHAIVCSRSMSMRIYGLSTFDEASQTIEAKLLRTLKPHTAPVVTIAVD
PTGTLLATGGADGSIKVWDIRGGFVTHTFHGHGGVVSALCFFEVPAADSNAKSSKKNQSK
QQAAEDDDEDTESSARTVSTAGFRLASGSEDGKMRVWDLHKRKSIASLESHVSLVRSLSF
SSSENALVSASRDKTVIVWDARTWKTRRIIPVLESVEAAAFIADSGLCVIGGENGKLRVW
DCNRGSEITEEQEAGEEFESVVAIQYTPGLPFVLTVHADQTLRLHSLESLSDYKPGSTLE
PLAIIRRISGNDDEIIDLAYIGPDRSMLALATNTESIRVVSVAPSEDRPSTQGEEYFGAD
VTHLEGHDDIIICIDADWSGHWLATGAKDNTARLWRIDPKTSSYTCFAIFTGHAESLGAI
ALPRVPPPVGSAAYNDPLNHPPAFLITGSQDRTIKRWDTSKLAPLTGEKPHYPKAIYTRK
AHEKDINAIDVDSTSELFASASQDRTVKIWAADEGSSVGVLRGHKRGVWSVRFAPQGTPI
INSDSRTSTSRGLAVTGSGDKTVKLWSLSDYSCLLTFEGHTNSVLKVLWLPPPQVSNNQT
DDEEDDEEAASARKNVIQDRPLIASAAADGLVKIWSPYTGELETTLDNHIDRVWALASPT
PSGSRADVKPTSSKLNTTPYAIASGSADATVTFWTDTTSSTYTAAVNASSARVEQDQELQ
NYIRAGAYREAITLALQLNHPGRLLSLFTSAINAADDPTAPAEDRERAAASLSGNPSIDE
VLQNLDPANLRTLLLRLRDWNTNARTSRVSQRILHALFRSYPASTFVELATQSVRGKDGR
AAAGLKDILQALAAYTERHYKRVEELVDDSYLVEWVLGEMDGGVGLGGLRDLTVGNVSDE
EQHEKDVIMLEA
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagctattgtcaaaacaactttcgaggcgtcccgcacgctccgccccatttac
accggaggtagcacggcgcttgatgccagtgggcgcatcctgctgagctgcgtgggcgag
gatgccttgatcgttgatttggagactggtaaccagcttactagcctggagggggatgga
gaaattgtcacaggtctggctattacgccttccgcctcacacgccattgtctgctcgcgc
tcgatgtccatgcgaatctacggcctctcaactttcgacgaagcttctcagaccattgaa
gcaaaacttctccgaacccttaagccccacacagctcccgttgtgaccattgctgttgac
cctactggaacactgcttgccactggcggtgccgatggttcaatcaaggtctgggatatc
agaggcggatttgtcactcacactttccatggtcatggtggtgtcgtttctgcactttgc
tttttcgaggttcctgctgccgacagcaatgccaagtcatctaagaagaaccagtctaag
caacaggctgcggaggatgacgatgaggatacggagagctctgcccgtacggtttccacc
gcaggattccgcctagcatctggcagtgaagatggcaaaatgcgcgtatgggatctgcac
aagagaaagtccattgcatcgctcgagtcacatgtttcccttgtccgcagtctgtctttt
tcctcgtcagagaacgcattggtctcggccagtcgagacaaaaccgtcatcgtctgggat
gcgcgtacttggaagactcgcagaatcatacctgttttggagagtgtggaagccgcggct
tttattgcagatagtggactgtgcgtaatcggtggagaaaatggcaagctccgagtttgg
gactgcaatcgtggaagcgagatcacagaggaacaagaggctggagaagagtttgaaagt
gttgtagctatccagtatacgcctggtctgcctttcgtcctcaccgtccatgcggatcag
actctccgcctccactcgctcgagtcgctgtctgattataagcctgggtcaactttggag
cctttggccatcatccgccgcatttccggcaatgacgacgagatcattgatctggcttac
attgggcctgatagatcgatgcttgcattggccaccaacacagagagtattcgtgtggtt
tcggttgctccctcggaagatcgaccctcaactcagggagaggagtactttggtgctgat
gtcacacatcttgaaggccacgacgatattatcatttgcattgatgcagattggtcggga
cactggttagcaactggtgctaaagacaacacagcccgtctttggcgtattgacccaaag
acgtcctcttacacctgctttgctattttcactggccatgccgagtcattgggagcaatc
gcccttccgcgcgtgccaccgcccgttggtagtgccgcatataacgaccctttgaaccac
ccgccagcctttttaataactggttcgcaagatcgcacaatcaagcgatgggacacaagc
aagttggcgcccctgacaggagaaaagccacactatcctaaggctatctatacccgcaag
gctcacgaaaaagatatcaatgccattgatgttgattctacatctgaattatttgcctca
gcatcacaagatcgcactgtgaagatctgggccgccgacgaaggctcgtcagtaggtgtc
ctccgtggccacaagcgaggtgtttggtcggtgcgattcgcgccacaaggcacaccgatt
atcaactctgattcacgtaccagcacgagccgtggtctagcagtcacaggctctggtgac
aagaccgtcaaactgtggagtctatctgactacagctgtctcttgactttcgagggccac
accaatagtgttctcaaagttctctggctcccgcctccgcaggtctcgaacaatcaaact
gacgacgaggaggatgacgaggaggccgcatcagcacgcaaaaacgtcatccaggaccgt
cccctcatcgcctccgctgccgcagacggtctggtcaagatctggtccccctacacaggc
gagctcgaaaccaccctggacaaccacatcgaccgagtctgggctcttgccagcccaacc
ccatccggctcacgtgcagacgtgaaaccaacctcctccaagctcaacaccactccctac
gccattgcctctggttctgccgacgcaacagtgaccttctggaccgatacgacatcatcc
acctacacagccgcggtcaacgccagctctgctcgcgtcgaacaggaccaagagctgcag
aactacatccgcgccggtgcctaccgtgaagccatcactctagcattgcaactcaaccac
ccgggtagactgctctcgctcttcacctccgccatcaatgccgcagacgacccaacagct
ccggccgaggaccgtgagcgtgctgcagccagtctgtccggtaatccgtccattgacgaa
gtcctgcagaacttggaccctgctaatcttcgtacgctcctgctccgtctccgggactgg
aacactaatgcgcgcacctcgcgcgtctcacagcgcatcctgcatgctctgttccgctct
tatcccgcgtctactttcgtggagcttgcgactcagtccgtccgcggaaaggatggtcgt
gccgcggctggtctgaaggacattctccaggcactagctgcatacactgagagacattac
aagcgcgttgaggagttagtcgatgacagctacctggttgagtgggttctcggtgagatg
gatggtggtgttggacttggtggactgcgggatttgactgtgggcaatgtcagtgacgag
gagcagcatgagaaggacgttatcatgttggaagcatag
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