Penicillium digitatum: PDIP_12410
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Entry
PDIP_12410 CDS
T04849
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_12410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdp03041
]
PDIP_12410
Spliceosome [BR:
pdp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
PDIP_12410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
26229564
NCBI-ProteinID:
XP_014537854
UniProt:
K9GHW6
A0A7T6XP24
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MSKRHAELPLEQNFSGSPVSKKARVEDDNDPDSRNGAAPAYPTSGEELRQDRNGVDIQGA
AEIEGEELEEAEKDPSGFSDIDEDVTALSAPKRQSAPMEGYGDLYLDTINREILDFDFEK
LCSISLSNINVYACLVCGKYFQGRGPKSHAYFHALEVGHHVFINIGTKKVYVLPEGYEVN
NKSLEDIKYVVDPHYTKNQVIKLDKEVHDAWDLSGSRYRPGFVGMNNIKANDYVNVVAQL
LAHVLPIRNFFLLHEFPTPGTPEIILRFSTLVRKLWNPKAFRSHVSPHELLQEIALRSSK
RFTLTNQADPVDFLSWFLNCLHLALGGSKKPSSTPTSVVHAAFQGRVRIESQAITAHSDT
QNARLVFTESGTINSQVTPFLILTLDLPPTPLFQSANRESSIPQVPLTTLLNKYNGYTAS
EKLAHRVRHRLLHPLPPYLFFHIKRFSKNRFVSERNPTIVTFPSPHNLDMSPYVEPNPNI
CSPGEPILYDLVANIILDPAIAAPGAMDEAVDKGVNAASGSGGSSSGAGGGSEKVSWLVQ
LHDKAMEAENTRAKNGGSTEKQMQGPEWLEIQDLFVKRAESETLFTREGYLMVWERRKVP
GNKGKGRA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagacacgcagagcttcccttggagcaaaacttctccggctcacctgtatcg
aaaaaggcgcgcgttgaggacgacaatgaccccgattctcgcaatggcgcagcgcccgca
tacccaacgagcggcgaagagctgagacaggatcgcaatggtgtggatattcaaggagcg
gctgagatagaaggagaggagctcgaggaggctgaaaaagatccctctggattctcggat
attgacgaagatgtcactgcactcagcgctccgaagcggcaaagcgctcctatggaaggc
tacggcgacctatacctcgacacaatcaaccgcgaaatcttggatttcgatttcgagaag
ctgtgctccatcagtctgtcaaacatcaacgtgtacgcatgtctcgtctgtggcaaatac
ttccaaggtcgtggtccgaaatcgcatgcatactttcacgcccttgaagttggacaccac
gtcttcatcaacattggcacgaaaaaggtctacgttttgcctgaaggatacgaggtcaat
aacaagagtttggaggatatcaaatatgtggttgatccacactacacaaaaaaccaagtg
atcaagctcgacaaagaagtacatgatgcctgggacctttctgggtcgaggtacagacca
gggtttgttggtatgaacaacatcaaagccaacgactacgtcaatgtagtagctcaacta
ctggcacacgttttgccaattcgcaatttcttccttctacacgagttccctacgcccgga
acaccagagataatccttcgtttcagtacgctggtgcgcaagctatggaaccctaaggcg
ttccggtcacacgtgtctccgcacgagttactacaggagattgccttgcgatcctcgaaa
cgtttcactctcacgaaccaggcagatcccgtggacttcttgtcttggttcctaaactgc
cttcacctcgccttaggagggtccaagaagccctcgtcaacacccacaagcgttgttcac
gcagcgtttcagggccgtgtacggattgaaagccaagctatcaccgctcactccgacacc
caaaatgcccgtttggtatttaccgaatctggcactattaatagccaggtcactcctttc
ctcatcctcacattggatctaccccccacacccctcttccaatctgccaatcgagagtcg
agtatcccacaggttcctttgactaccctgttgaacaagtataacggctacacggcttca
gagaaactggcccaccgtgtccgacaccgtctcctccaccctcttcctccctaccttttc
ttccatattaagcgctttagtaagaaccgctttgtttctgagcgaaacccaaccatcgtc
accttcccttctccgcacaacttggatatgtccccctatgtcgagccaaatcccaatatt
tgctcaccgggtgaaccaatcctctacgatttagtcgcaaacatcatcctcgaccccgcc
atcgctgcacccggtgcgatggatgaagctgtggataagggcgttaatgctgcgtcagga
tccggcggttcctccagcggagcaggtggcggcagtgagaaggtatcatggcttgtccaa
cttcacgataaagctatggaagccgagaacactcgggccaaaaatggcggctccacagag
aagcagatgcagggcccggagtggcttgagattcaggatttatttgttaagcgcgcggaa
agcgagacactattcactcgtgagggatatcttatggtctgggagcggcgcaaagtgcct
ggaaacaaagggaagggccgtgcatga
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