Penicillium digitatum: PDIP_17610
Help
Entry
PDIP_17610 CDS
T04849
Name
(RefSeq) DEAH-box RNA helicase (Dhr1), putative
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_17610
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PDIP_17610
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
Helicases
PDIP_17610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
WHD_HA2
DEAD
OB_NTP_bind
AAA_22
ResIII
nSTAND3
AAA_19
SLFN-g3_helicase
nSTAND_NTPase5
AAA_23
BSP_II
T2SSE
PhoH
RMD1-3
Motif
Other DBs
NCBI-GeneID:
26230084
NCBI-ProteinID:
XP_014537452
UniProt:
K9GH77
A0A7T7BMM0
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MPPKFTPRLRKQRHRQNPDGESTDTNVAQLQPVSKDEKEARRQKLRGELQEQHPQMSSKK
QKRLDKYIENKLKKEENVELLKKLAQSSVDTSSLKSSRDLSKRKRQGDDISAPTISTPKH
NAPADISGYDTDDSDIHLKVSNPATDPDEQKLREEAAAGSGLKRPLELGADGFPVLKKRK
RAPKKKPAPAPVKAEVAWEGFDSDEEEGDVEEEEEEDDDDEDGMDEESESEIEEDSEEED
TSSSEDNSPDEDEEDSEESEDDDEMDEDKPTLKTRQSAFKSWAVQQINEAAGFKPTEGAV
TQEEQVFDPSKLPATHNTTQEEPLPRELQVTHGDPNRKAYSVAVDRTEEIQAARLGLPVV
GEEQKIMEAIHNNSVVVIWGATGSGKTTQLPQFLFESGFGSPGSPNPGLIGVTQPRRVAA
VSMANRVSQELGQHAEKVSYQIRFESTASKKTAIKFMTDGILLREIADDFALRKYSIILI
DEAHERSVNTDILIGMVSRIVGLRKSLSEEDPSVKPLKVVIMSATLRISDFTENPSLFRD
GAPPLVQAEGRQYPVAVHFSRRTQRDYVEDAFRKVSRGHRKLPAGGMLVFLTGQNEIRQL
SKRLKQAFKPTQREDTTQAKVQLSATEAPLEAEDLELGGTEMDNPGHDDYDSDMEITGLD
DAEEDEGFELAEGEEAMDSSTRVHVLPLYSQLPTKEQMKVFEPAPENSRLIILATNVAET
SLTIPGIKYVFDCGRAKEKQFDLFTGVQSFQVGWISKASANQRAGRAGRTGPGHCYRMYS
SAVYESEFAEYTDPEILRTPIEGVVLQMKSMGLHNVINFPFPTPPSRQGLAKAEKLLKNL
GALTADGQVTPIGRRLSTYPLSPRFSKMLHIGHQHGCMPYVIALVAALAVGDLFVPENQL
DPNQPLPTTAKKQVDDDSDSDSDRRKVYTNADRLKDDERAQRNKAYARAQRLFSKHDDTS
DALKSLSAICAYGYASDGDSFSEKMFLRAKAFKEATQLRRQLTDIVRSNNPGLVPAYEAR
LPEPSSKQIKALKQIVTAGFIDHVAIRADQAPVPPENPRTPRRAIDVPYLTLFRSRDGKG
EDLQERAVYVHPSSLLAKLSPKEMPKYITYSHLQQSSASLVSDQVPRIRMFPLVVPSGLQ
LSAIAHDTPLIEYGKPIGKADAIEGVPPRRSCWVIPSLVGDEGGVGWPMPAKKVVQKKDA
KQGWVIEKFVA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaatttacaccacgtctgagaaaacaaaggcaccggcaaaacccagacggc
gagtcgacagataccaatgtcgctcagctccagcccgtctccaaggacgagaaagaggcc
cggcgacagaagctgaggggagagctacaagagcagcatccccagatgtcttcaaagaag
cagaagcgcttggacaaatacattgaaaacaaactcaagaaggaagaaaatgtcgaattg
ttgaaaaagctagcgcagtcttctgtcgatacttcatctttaaagagctcccgagatctt
tctaagcgcaagagacagggtgacgacatatctgcaccaaccatttccacgccgaaacac
aatgctcctgcagacatctcgggatatgataccgacgattcggatatccacctgaaagtg
tccaatcctgcaacagatcccgatgaacaaaagttacgagaagaggcggctgctggaagt
ggacttaaacgaccattggaattaggagctgatggattccctgttctaaagaagcggaag
cgcgcaccgaagaagaaacccgcacctgcaccagtaaaagcagaggttgcatgggagggc
tttgattcggatgaggaggagggagatgtagaagaagaagaagaagaagatgatgatgat
gaagacggtatggacgaggagtccgaaagtgaaattgaagaggactcggaagaagaagat
acttcgtcctctgaagacaattccccagatgaggatgaggaagactcagaagaatcagaa
gatgatgacgaaatggacgaggataagccaacgctcaagacccgccagtcggccttcaaa
tcttgggcggtacaacagatcaacgaagccgcagggtttaaacccaccgagggagcggtg
acccaggaagagcaggttttcgatccatctaagttgccagcaacgcacaataccacccaa
gaagaacctctcccccgggagcttcaggtgactcatggcgatcctaatcgcaaggcctac
agtgttgcggttgaccgtacggaggaaatccaagctgctcgtcttggactccctgttgtt
ggtgaggaacagaaaatcatggaggcaatccacaacaactcagttgtcgttatttggggt
gctaccggaagtggaaagacaacccagcttccccagttcctcttcgaatccggcttcggc
tccccaggcagccctaatccgggtcttattggtgtcactcagcctcgccgagtcgcggcc
gtgagtatggcgaaccgcgtttctcaagagttgggtcaacatgccgagaaggtttcttat
caaatccgatttgagtctacggcatccaagaagacagccatcaagttcatgactgatggt
attcttctacgagagatcgcagatgactttgcccttcgcaaatactctatcattcttatt
gatgaggctcacgagcgcagcgtcaacaccgacatcctgattggaatggtcagccgtatt
gtgggcctacgcaagtctttgagcgaggaggacccgtctgtcaagcctttgaaggtcgtc
atcatgtcagccactctccgtatttcggatttcaccgaaaacccaagtcttttccgtgat
ggtgctcctcccctggttcaagctgagggtcgccaataccctgttgcagttcatttctcc
cgccgcacacagcgtgactatgttgaagatgctttccgcaaggtttcacgtggacaccgc
aaactacccgccggtggaatgcttgtgttcttgactggccagaatgagatccggcagctt
tctaagcgtctgaagcaggcattcaaacctactcagcgggaagacacgacacaggcaaag
gtgcagctttcagctactgaggcacctctggaagcagaggacctggagttgggcggcacc
gagatggataacccaggacatgatgattacgacagtgacatggagatcaccggactggat
gacgcagaggaagatgaaggcttcgaacttgctgaaggggaagaggccatggactcgtca
actcgcgttcacgtcttgcctctatactcccaacttcctacgaaagaacagatgaaggtt
tttgagccagcccctgaaaactcccgactgatcatcctcgcaaccaacgtcgccgagaca
tctctcaccatccccggtatcaagtatgtctttgactgcggtcgcgccaaggagaagcag
ttcgatctcttcacgggggtccagagcttccaggtcggctggatcagcaaggcaagcgca
aaccagagagctggccgagctggccgaacagggcctggtcactgttaccgaatgtactca
tctgcagtctatgaaagcgagttcgccgaatacaccgacccagagatcctccgcactccc
atcgaaggtgttgtcctccagatgaagagcatgggtcttcacaacgtgatcaacttccca
ttccccacacccccgagccgccagggtcttgcaaaggcagagaaactgctcaagaacctc
ggtgccctcacagccgacggccaggtaacccccatcggccgtcgtctctcgacatacccc
ctctccccccggttcagcaaaatgctccacatcggccatcaacacggctgcatgccctac
gtgattgccctagttgcggccctagcagtcggcgacctcttcgtcccagagaaccagctc
gacccgaaccaacccctgcccaccacagccaagaagcaagtcgacgacgacagcgacagc
gacagcgacagacgcaaggtctacacaaacgcagaccgactcaaagacgacgagcgtgcc
caacgcaacaaagcatacgcccgcgcccaacgcctcttcagcaaacacgacgacacctcc
gacgctctaaagtccctctctgcaatttgcgcctacggctacgcctccgacggtgactcc
ttcagtgagaaaatgttcctccgcgcaaaggccttcaaagaagcaacccagctccgtcgc
caactaaccgacatcgtgcgctcaaacaacccaggcctagtccccgcctacgaagcccgt
ctaccagagccctcttctaagcaaatcaaggccctcaagcagatcgtcacggcaggtttc
atcgaccacgtcgctatccgcgctgatcaagcacccgtcccgccggagaacccgcgcacc
ccccgtcgcgccattgacgtaccttacctgacgctcttccgttcccgggacggcaagggt
gaggatctacaggaacgtgctgtttacgtgcatccatcttcgctgcttgctaagctctcg
ccgaaggaaatgccaaagtatatcacctattcgcatctccagcagtcttcggcttctctg
gtctcggaccaggtgcctaggattagaatgttcccgcttgttgtacctagtgggttgcag
ctttcggcgattgcgcacgatacaccgcttattgagtatggaaagccaattggtaaggct
gatgctattgagggtgtaccgccgcgcagatcttgctgggttattccttctttggttggc
gatgaaggtggtgtgggttggccgatgcctgctaagaaggttgtgcagaagaaggatgcg
aagcagggttgggtcatagaaaagtttgtggcatag
DBGET
integrated database retrieval system
