Penicillium digitatum: PDIP_18690
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Entry
PDIP_18690 CDS
T04849
Name
(RefSeq) DNA replication factor C subunit Rfc4, putative
KO
K10755
replication factor C subunit 2/4
Organism
pdp
Penicillium digitatum
Pathway
pdp03030
DNA replication
pdp03410
Base excision repair
pdp03420
Nucleotide excision repair
pdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDIP_18690
03410 Base excision repair
PDIP_18690
03420 Nucleotide excision repair
PDIP_18690
03430 Mismatch repair
PDIP_18690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_18690
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_18690
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_18690
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PDIP_18690
DNA Replication Termination Factors
ELG1-RFC complex
PDIP_18690
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PDIP_18690
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PDIP_18690
Check point factors
HRAD17(Rad24)-RFC complex
PDIP_18690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_RFC1
DNA_pol3_delta2
AAA_14
RCF1-5-like_lid
nSTAND3
Gp44_lid
AAA_22
RuvB_N
AAA_16
Viral_helicase1
AAA_3
nSTAND_NTPase5
DNAX_ATPase_lid
Mg_chelatase
Rad17
MeaB
NTPase_1
AAA_11
AAA_assoc_2
AAA_19
KTI12
AAA_18
NB-ARC
Motif
Other DBs
NCBI-GeneID:
26230192
NCBI-ProteinID:
XP_014537560
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MVQAESSSTASRNGAKANTAGAPVDYELPWVEKYRPTFLDDIVGNTETVERLKIIAKDGN
MPHVIISGMPGIGKTTSVLCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKKV
TLPQGRHKLVILDEADSMTAGAQQALRRTMEIYSSTTRFAFACNQSNKIIEPLQSRCAIL
RYARLTDAQVVKRLMQICEAENVEHSEDGIAALVFSAEGDMRQAINNLQSTWSGFGFVSG
DNVFRVVDSPHPVKVQAMIKACWEGKVDVALEGLNELWTLGYSSHDIISTMFRVTKTIPT
LSEHSKLEFIREIGFTHMRILDGVQSLLQLSGCVAKLCKINMKPDLFEPPKA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggttcaagctgaatcttcctcaactgcttctcgcaatggtgccaaggcaaatactgct
ggtgcccctgtggactatgagctcccctgggtcgagaaatatcgcccaaccttcctcgat
gatatcgtcggcaacactgaaacagtagagcgattaaagatcattgctaaagatggtaat
atgccgcacgtcattatctccggcatgccgggtattggaaagaccacttccgtactatgt
ctggcgcggcaacttctgggagatgcgtacaaggaggcagttttggagttgaatgcaagt
gatgagagaggtatcgatgtggtgcggaatcgaatcaaagggtttgcccaaaagaaggtt
accctgccccaaggacgccataagttggttatccttgatgaagccgatagtatgaccgcc
ggtgctcaacaagccctgcgacgaactatggaaatatattcctctaccacacgctttgcc
tttgcctgcaaccaatcgaacaagatcatcgaaccccttcaatcccgttgtgccattctc
cggtatgcccggttgacagatgctcaggttgtgaaacggttgatgcaaatttgcgaggcg
gagaacgtcgaacactccgaggatggaattgctgcacttgttttcagtgcggagggtgac
atgcgtcaggctatcaacaacctgcagagtacttggtccggtttcggtttcgtcagcgga
gacaatgtttttcgagtagtcgatagcccgcacccggttaaagtccaggccatgatcaag
gcttgctgggaaggcaaggtggatgtggcactagagggtttgaatgagctatggaccttg
ggttactcttctcacgatatcattagtaccatgttccgagtcaccaagaccatccccacg
ttgtccgagcattccaagctagagttcattcgggagattggattcacgcatatgcgcatc
ctagacggtgtgcaatcactgcttcaactgagcggctgtgtggcaaagctttgcaagata
aatatgaaacccgatctgttcgagcctcccaaggcttga
DBGET
integrated database retrieval system
