Penicillium digitatum: PDIP_18750
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Entry
PDIP_18750 CDS
T04849
Name
(RefSeq) RNA polymerase II Elongator subunit, putative
KO
K11374
elongator complex protein 2
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdp03016
]
PDIP_18750
Transfer RNA biogenesis [BR:
pdp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PDIP_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_DCAF12
WDR90_beta-prop_4th
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_Vps41
NBCH_WD40
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
26230198
NCBI-ProteinID:
XP_014537566
UniProt:
K9GGS0
A0A7T6XQE1
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MVVVETDYISVGGNRHPGAADWDVQTGVLAFGADNNVALWDPLDKTDRGIYALLVGHTDK
VSVVRFYTCPASRTRFIVTGSVDRTIRVWQEDKTDLHNYVLASTLEGHTSSVNAIAVADG
TDIIASGAADGTVRIWRINAQEKLKCELVETITMKPRFFPLSLSLQGLQGDSDKPLVLAV
AGTTTKVQIYVSETSIGKPEFKRRAVLAGHEAWIKALSFTQDKQGNGDILLASASQDRYI
RLWRLRRGEASAPAPIDDTDPLLGGMEPTLSNKAHEFEAAGSKYSITFEALLFGHEDWIY
TIAWNPDSKRQQLLSASADNTITIWEQDQASGVWMSAERMGEISVQKGSTTATGSAGGFW
IGLWSPDGKQVVSLGRTGSWRVWRHDSDADLWAQRFGISGHVRSANGVQWEPTGGYLLST
SSDQTTRLHAKWMQGDTGSWHEFSRPQIHGYDLNCIDTLGPSQFVTGAEEKLLRVFNEPK
PIAQLLERLTGFKQANDKDLPDTAEIPVLGLSNKALGDEAPVEEDELKAPTAAPVASASL
AANHPPLEDQLSRYTLWPEHEKLYGHGYEISAVAVSHDRKLIATACKASSIDHAVIRLYD
TSDWHEIKPSLTAHSLTITDLSFSSDDRYLLSVGRDRQWAVFQRSGADPTMFTNLSVNPK
GHSRMILGAAWAPATTDHVFATAGRDKSVKIWQKSEDTFVCKTTVGLTSAVSAIAFLSAT
HKGTYVIAVGEDNGVISIHRIVADTLEAHHIVTIDKVASPSKAITQLSWRPVPAAEADTR
NRFELAVASEDTSTRIYAISNMLS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcgttgaaacagactatattagcgtggggggaaaccggcaccctggagccgcg
gattgggatgtgcagacaggcgtgctcgccttcggtgcagacaacaatgtcgccttatgg
gatcccctagacaagactgatcgtggtatctatgccctgcttgttggtcacaccgacaaa
gtcagcgtcgttcgattttatacatgccccgcctcgagaacgagatttatcgtcaccggc
tccgtcgaccgcacaatacgggtatggcaagaagacaaaaccgatttgcacaactatgtc
cttgcgtctacccttgagggccatacaagctcggtgaatgcgattgccgtggccgatgga
acggacatcatcgcatctggagccgctgatgggacggtccgaatctggagaataaatgca
caagaaaaattgaagtgtgagctagttgaaacgatcacaatgaaaccgcggttcttcccg
ctatctctgtcattgcaggggcttcaaggcgactcggacaagccattggtgttggccgtt
gcaggtacaacaaccaaggttcagatctacgtctcagaaacgtccatcggcaagccagag
ttcaagcgccgggctgtgcttgcgggccatgaagcctggattaaggcactttcgttcacc
caggataagcagggtaacggtgatatcctgctagcgtctgcaagtcaagacagatacatc
cgtctttggcgactgcgccggggtgaagcaagtgcccctgctccaatagatgatacagat
cctctacttggaggaatggagcccacgctgtcgaacaaagcccatgagtttgaggctgca
ggatcgaaatactccattactttcgaagctcttctctttggacatgaagactggatctat
actattgcatggaacccagattcgaagcggcagcagcttctctcggcatcggctgacaat
acgatcacaatttgggaacaagaccaagcatcaggtgtttggatgtccgcagagagaatg
ggagagatcagtgttcagaaaggatccaccaccgcgacaggtagcgcaggtggcttctgg
attgggctctggtcaccggacgggaagcaggtggtgagtcttggtcggacaggtagttgg
agggtctggcgacatgattccgacgcggatctttgggcacagaggttcggtatttcgggc
catgtgcgctcagcaaacggtgtacagtgggagcccactggaggttacctgctttcaacc
agctcagaccaaacaacccggcttcatgcgaagtggatgcagggagatacaggttcatgg
catgagttctctcgccctcagattcatgggtacgatttgaactgtatcgacaccctgggt
ccctcacagtttgtgactggcgcggaggagaagcttttgcgtgtgttcaatgagcctaaa
ccaattgctcagttgctcgagagactcactgggtttaaacaagcgaatgataaggacctc
ccagacactgctgaaatcccagtgctgggtctctcgaataaggcacttggagatgaggcg
ccagtggaagaggatgagctaaaagccccaactgcggcgccagtcgcttctgcctcgctg
gctgctaaccacccgccactagaagatcagttgtctcgctacacattatggccggagcac
gagaagctctatggccatggctatgagatttcagcagtggcagtgagccatgaccgtaag
ctcattgcgaccgcctgcaaggccagctcgattgatcatgcggtaattcgcctctacgat
acgtcggactggcatgagatcaaaccttctctcactgcgcactcgttgaccatcacggac
ctttcattctcgagtgacgatcgttatcttcttagtgttggacgagatcgccaatgggcg
gtcttccagcggagcggtgcagatccaactatgtttacgaacctcagcgtaaaccccaag
ggtcactctcgaatgatcctaggtgcagcttgggccccagctacaacagatcatgtcttt
gccaccgcaggacgtgacaaatctgtgaagatctggcaaaagtctgaagacactttcgtc
tgcaaaacgaccgtaggcctgacatcggcggtctcggcgattgctttcttgtccgcaaca
cacaaaggcacatatgttattgctgttggcgaggacaacggtgttatctctattcaccga
attgttgctgatactctcgaagcacaccatatcgtaaccatcgacaaagtggcgtcgcct
tccaaggcaattacgcaactatcatggcggccagtgccagctgcagaggcggataccagg
aatcggtttgaactagcggtggcaagtgaggacacgtccacacggatttatgccatctcg
aacatgctctcatga
DBGET
integrated database retrieval system
