Penicillium digitatum: PDIP_18800
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Entry
PDIP_18800 CDS
T04849
Name
(RefSeq) snRNA cap binding complex subunit (Gcr3), putative
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
pdp03015
mRNA surveillance pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_18800
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_18800
03015 mRNA surveillance pathway
PDIP_18800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_18800
03041 Spliceosome [BR:
pdp03041
]
PDIP_18800
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PDIP_18800
Spliceosome [BR:
pdp03041
]
Common components
Common spliceosomal components
Cap binding complex
PDIP_18800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
26230203
NCBI-ProteinID:
XP_014537571
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MAETDRRNQGYRGGRKRRYRDDDEFDRRPQRRRYEEPLFVQVRRQLLTIAESAARRAEDD
VQGIAKTVTDNYDDEEIRRDFINIALDLVLEQPMKIPFIAGTVLVAHSFKPELGTEVLSK
AAEALQKYIEIGAWREVKLLIRFLGILQPVYEGDGIFPLLEELFARAVDLQTASSEDLLG
LELVKIIQFTIPYVMLSPATGFEAQASALLEKTDIIASTPHALVDLVNTFSPEENSEAAG
QSVISLMQTQLQGEATQGWELKCLPRPWKDVRDPETDEPKSFESVTKVPFPTITVPNPVP
NGARPLFPEVYLSVYANQEVDTVPAITDISSSLIRDALVDTINLLDFNRVATAKFLIDID
CYFTPTTFVKRATPFDRMREFIGELQPWKPEDVAVDAVFSQLFQLPASEHKLVYYHSVLT
ECCKIAPAAIAPSLGRAIRFLYNSLETMDLELSNRFLDWFAHHLSNFGFTWKWSEWTDDL
DLPAIDPRMAFIYGALDKEIRLSFAQRIKGTLPDPYPKLITPGKEKDTPEFKFSSEMAPY
SNEGQELMQLIRKKASDEEIQPVITAIEDQAKSQGVDDPKIPSTDAFVTSLCFVGSKSLS
HVLSCIERSKDRLLAIGTDSQHARRQIITSVMDYWVDQPGIAINIIDKLLNYTILSPLSV
LEWALTESVAAGTILSKPHVFEMISATVGKVTNRMRQIVAARAQPGLYEPQLSVIDDTLV
RERADMQALFKYIEDSIVSVAAGSNDEQMERGDGSGTLPEDAIIRQWGRRWLRVFRRKAA
VEESFISDALVNATPLGTQAPPISEREDAADGDLDIADADAQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaccgaccgtcggaaccagggctaccggggtgggcgcaaacgccgttacaga
gatgatgatgaattcgatcgccgccctcaaaggcgcagatatgaggaaccattgttcgtc
caggtccgacggcagttgttgaccatcgcggaatcggctgctcgcagagcagaagacgat
gtccagggtattgcaaagacagtcacggataattacgacgacgaggagatccgccgcgat
tttatcaacatcgcccttgatctcgttctcgaacagcccatgaaaattccttttatcgcg
ggcacggtcctggtcgctcatagcttcaagcccgagcttggaacggaggttttgagcaag
gcagctgaggccttgcagaagtatatcgaaattggtgcatggcgtgaagtcaagcttctt
attcgcttcctgggtattctccagccagtctatgagggtgacggtattttccctcttctg
gaagagctgttcgctcgtgcagtcgatctccagactgcctcttcggaagatcttctgggc
cttgaattggtgaagattattcagttcaccattccttatgttatgctatcccccgccact
ggcttcgaggcccaggcttccgcgcttctagaaaagaccgacatcatcgcatctacgccg
catgccctcgttgatttggtgaacacattcagccccgaagagaactcggaggcagctggt
caaagtgttatcagtttgatgcagactcaacttcagggggaggccacccagggctgggag
ctgaagtgcctccctcgtccttggaaagacgtccgggatcccgaaactgatgagcccaag
tcttttgaatcggtgaccaaggttcctttccccacgatcactgtgccaaaccctgtaccg
aacggcgcgcgtcctctcttcccggaggtctatctttcggtgtatgccaaccaggaagta
gacaccgttcctgcaatcacagacatctcctcgtcgcttattcgagatgcactggttgat
actatcaatctccttgacttcaaccgtgttgctacggccaagttcctgatcgatatcgac
tgctattttacccctaccacgttcgtgaagcgtgccacgcctttcgaccgaatgcgcgag
ttcattggagagttgcagccgtggaagcccgaggatgttgcagtggatgcagtgttctcg
cagctatttcaattgccagcatcagagcacaaactcgtttactatcactctgttctcacc
gagtgctgcaagattgccccggcggcaattgcgccaagtttgggccgtgcaatccgattc
ttgtacaacagcctggagaccatggatttggagctcagcaaccgtttcctggactggttc
gctcaccacttgagtaacttcggatttacatggaaatggagcgagtggaccgacgatctt
gatctgcccgccatagatccgagaatggcgtttatatatggtgctttggacaaggaaatt
cggttgagctttgcgcagcgcattaagggaactcttcctgatccctaccccaagttgatc
acaccaggcaaagagaaggatactcccgagttcaaattttcctctgaaatggcaccgtac
tccaacgaagggcaagaactcatgcagctcattcggaaaaaggctagcgacgaagaaatt
cagccagttatcacagccatcgaagaccaggcgaagagccagggcgtcgacgaccctaag
ataccctcgacagatgcattcgtaacctccctctgcttcgtcggatccaaatcgctctct
catgtcctgtcatgcatcgaacggagtaaagatcgccttctggccatcggcacagattct
caacacgcccgccgccaaatcattacctccgtcatggactactgggtcgaccagcccggt
attgccatcaacatcatcgacaagctgcttaactacaccatactcagcccgctctccgtc
cttgaatgggccctcactgagtctgtcgcggcagggaccatcctttcaaagccccatgtc
ttcgagatgatctccgccaccgtcggcaaggtcactaaccgcatgcgccagatcgtcgcg
gcccgcgcccagcccggcctctacgagccccagcttagcgtcatcgacgatactctcgtt
cgtgagcgcgcagacatgcaagccctcttcaagtacatcgaggattcaatcgtatccgtc
gctgctggaagcaacgacgaacagatggagcgcggtgatggcagcggcactctgcccgag
gacgccattatccgccagtggggccgtcgctggctccgcgtgttccggagaaaggctgcc
gtcgaggaatccttcatctcggatgccctggttaatgctactcctctcggcacccaggcc
ccgcctatttctgagcgggaagatgctgcggatggagatttggatattgccgatgccgat
gcgcaatag
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