KEGG   Penicillium digitatum: PDIP_19870
Entry
PDIP_19870        CDS       T04849                                 
Name
(RefSeq) DNA-directed RNA polymerase I, II, and III subunit Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pdp  Penicillium digitatum
Pathway
pdp03020  RNA polymerase
pdp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PDIP_19870
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDIP_19870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdp03021]
    PDIP_19870
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_19870
Transcription machinery [BR:pdp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PDIP_19870
  RNA polymerase III system
   RNA polymerase III
     PDIP_19870
  RNA polymerase I system
   RNA polymerase I
     PDIP_19870
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PDIP_19870
SSDB
Motif
Pfam: RNA_pol_Rpb6 KOW
Other DBs
NCBI-GeneID: 26230310
NCBI-ProteinID: XP_014537163
LinkDB
Position
Unknown
AA seq 153 aa
MSDYGHDDDVEETFDYEPGEDVFDEEPEEHEGLEVEDGIEGEDYPTTNGDNVVVSGDPNA
GYAGKVMEQSREKKVPNDQRTTTPYLTKYERARVLGTRALQISMNAPVLVDLEGETDPLQ
IAMMELNQKKIPLIIRRYLPDGWYEDWTCEELL
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtctgactacggccacgacgacgacgtcgaagagaccttcgactacgagcccggcgag
gatgtgtttgatgaggagccggaggaacatgaaggcctcgaggtcgaagacgggattgag
ggagaagattaccccaccaccaacggcgacaatgtcgtggtttctggcgaccccaatgca
ggatacgcaggaaaagtgatggagcagtcgcgcgagaagaaagtacccaacgatcagcgc
accaccaccccgtacttgaccaagtacgagcgcgcgcgtgttctcggtacccgtgccctg
caaatcagtatgaacgcccccgttcttgtcgacctcgagggtgaaaccgatcccctgcag
atcgctatgatggaattgaatcagaagaagatccccctgatcattcgccgatacctgccc
gatggatggtatgaggattggacatgcgaggagctgttgtag

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