Penicillium digitatum: PDIP_22560
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Entry
PDIP_22560 CDS
T04849
Name
(RefSeq) RNA polymerase II transcription elongation factor (Ctr9), putative
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_22560
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PDIP_22560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_14
TPR_16
TPR_7
TPR_17
TPR_12
TPR_6
TPR-S
Motif
Other DBs
NCBI-GeneID:
26230578
NCBI-ProteinID:
XP_014537029
UniProt:
K9H3C8
A0A7T6XPU1
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MAPLENGQPNGLNGNAVPSASPLSNLRFSDIPDAIDIPASSFDSEVEVSLLELPDDPTEL
CTLLENEKAAKNFWVIIALAYAKRKQIDHAIDILTKGLASVAHGATKEKLGLLGWICWML
LLKSRHAPRVAPEGELYSEAKTKDHYLQLATSTLNEASRLNPAYPPLFLARGVLCLLRAS
LYPPRAVRPGAIDTSERVESLRQALKCFDESSKAFGGRNIMAILGRARAHYMLGRYADAL
EGYQKALIKMPNLTDPDPRIGLGCCLWQLGFKDQAKIAWERSLYLNPESKVANVLLAVYY
LHDSSRRATTDPMFGSMYKLAMTQYTQKAFKLDKEYPMTCSMFASYFLLRKSYPTVETLA
RRAIEHTDVMSIASDGWYLLGRKSHYEGDDALATEFYNRSDQARGGVDKGYLPAKFGAVQ
MQITNKDFDGAKFRLEKIIQLSKNPEAMTLLAAIHAEEVFAAQKSGSKEDKSTEAKRAIT
LLESVRCMWKDEKLNISPDESVLVYLSRLYEGTAPDKSMQCLTQLEQIQIGEIPGDARPD
IEDQDELNAALRESLPPQLLNNMGCFLYQNEKIALARGLFQSALNACVQSKEKEDGTDTD
ALVTTISYNLGRTYEAADMWDEAKKVYEGLLERHADYTEANARLTYIALRQSPTDEGPKK
IGKLYEADSTNLEVRSLYGWYLSKAKKRVANLAEDSEQRHFKHTLQYYDKHDRYALTGMG
NVHLLAARDMRRDTDQEKEKRRKIYQRAVEFFDKALQLDPKNAYAAQGIAIALIDDKKDH
SSAVQILSKIRDTIKDPSVYLNLGHVFAELRQFSRSIEHYEAALSKDRQRDVQILACLGR
VWWLRGKQEANLAAMKTALDYATRARDVSPDQLHLQFNVAFVQNQIASLAYGLQPTQKTL
QDVQEAAEGLKEAIETFERLSKEKNPPYPSAALEQRANMGRTISKQLDRAMQSQKEYEEK
NAAKLQQAREAREEAARIREEELRKAQEVEMERKKRIAEERAQMVEEVQRHALQRAEEER
AREDAELTNDSETGDRVKRKKKPTIKRKKKGGDDFIADEDEGLAAHSAAESEGETAPKKR
RRLERRSGGKAQAAKSEKPGKYKSSEMVVDSDDEEAARSAGEDKDDLFGDDDDPAEEAAP
RRRGKASRRIADDDEDEDEEEEEVQAEVEAEKYGNEDNDDELFGEDTEMQE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcttgagaatggccaacccaatggcctgaatggtaatgccgtaccttcagct
agcccattgagcaacctgcgattttccgacatccccgatgcaattgacattcccgcatcc
agcttcgacagtgaagtcgaagtcagcttgctcgagctccccgatgacccgactgagctt
tgcaccctcttagagaatgaaaaagcggctaagaatttctgggtgatcattgcgctcgcc
tacgcgaagcgaaagcagatcgaccatgccatcgacatcttgactaagggtctggcctct
gtcgcccacggtgcgacaaaggagaaactcggccttctgggctggatctgttggatgctg
ctgctgaaaagccgacacgctcctcgagttgcacctgaaggggaactatactcggaagcc
aagaccaaagatcattacctccaacttgcgacgtcgacgttaaacgaggcttcgcgactc
aacccggcttaccctcctctcttcctggcgcgaggtgtcttgtgtctcctccgtgcatca
ctataccctccccgtgctgttcgtccgggtgcgattgatacatcagaaagggtcgagtca
ctgcggcaggctctgaaatgtttcgacgagtcatccaaggcctttggtggccggaatatc
atggctattctgggacgtgcccgcgcgcattacatgctaggaagatacgcagatgcactc
gaaggataccaaaaggcactgatcaagatgccaaaccttacagaccctgatcctcgtatt
ggtctcggatgctgcttgtggcagctgggcttcaaggatcaagccaagatagcttgggaa
agatcgctatatctaaaccccgagtccaaggttgccaacgtcctgcttgcagtctactac
ctccatgacagctctcgccgagccaccaccgaccccatgtttgggtcaatgtataaatta
gccatgactcaatacacccagaaggcattcaagctggacaaggaatacccgatgacctgc
tcaatgttcgccagctacttcctcctccgcaaatcataccccaccgtcgagacattggca
cgtagagccatcgaacacacagatgttatgtccattgccagtgacggctggtaccttctc
ggtcgcaagtcgcactatgaaggtgacgatgcccttgccacggagttctacaaccgttca
gatcaagcccgcggtggagtcgacaaaggctatcttcccgctaaattcggcgctgtgcaa
atgcagatcacgaacaaggactttgacggtgccaagttccgactagagaagattatccag
ctatcaaagaatccggaggcgatgacccttcttgctgctattcatgcggaagaggtattc
gctgctcagaagtcaggtagcaaagaagacaagtcgaccgaggcaaagcgggccatcact
ctgcttgagtcagtgcgctgtatgtggaaggatgagaagctgaacatctctcccgacgag
tccgttcttgtttatctttcccgtctctacgagggcacggctccagataagagcatgcag
tgcctgacccaactggaacagatccagattggtgagattccgggggatgctcgacctgat
atcgaggaccaagatgaattgaacgctgctcttagggagagtctcccgccgcagctcctc
aacaacatgggctgcttcctataccagaacgagaagattgctctggctcgtggcttgttc
cagtccgcactcaacgcctgtgtgcaatccaaagaaaaagaagatggcaccgacaccgat
gcgctcgtcaccacaatcagctacaacctgggacggacatacgaggcagccgacatgtgg
gatgaagccaagaaggtctatgaaggtctactggagcgtcacgctgactacacggaagct
aatgcacgcctgacatatattgccttgcgccagagccccacagacgagggccctaagaag
attggcaagctctacgaagcggacagcacaaatctggaagttcggtcgctctacggatgg
tatcttagcaaggcgaagaagcgagttgccaacctggctgaagatagtgagcaacgtcat
ttcaagcacacattgcagtactacgacaagcatgatcgctacgccttgactggaatgggc
aatgtgcatctccttgccgcccgtgacatgcgtcgcgacacagatcaagagaaggaaaag
cgtcgcaagatctaccagcgtgctgtggagttcttcgacaaggctcttcaactggatccc
aagaacgcatacgcggcccagggtattgcgatcgccttaatcgatgacaagaaagaccat
agctctgctgtgcaaatcttgtccaagattcgcgatacgatcaaggatcctagcgtctac
ctcaacttagggcatgtcttcgctgagctccgccagttctcacggtcaatcgaacactac
gaggctgcgttgtcgaaggatcgccagcgtgatgtacaaatcttggcttgccttggtcgt
gtatggtggctgcgaggcaagcaggaggcgaatttggccgcaatgaagacagcactcgac
tacgccacgcgtgcacgcgacgtctcgccggatcaacttcacctgcagttcaacgttgct
ttcgtgcagaaccagattgcctcgctcgcctacggtctgcagcctacccagaagacgctc
caggatgttcaagaagcagcggagggtctcaaggaggccattgaaaccttcgagcgtctt
tcaaaggagaagaaccctccttaccccagcgccgcactggagcagcgagccaacatgggc
cgcacgatcagcaagcagcttgaccgagccatgcagagccagaaggagtacgaagaaaag
aacgctgcgaagctccagcaagcccgcgaagcccgcgaagaagccgcgcggatccgggaa
gaggagttgcgcaaggcccaagaggtcgaaatggagcgcaagaagcgcatcgccgaggaa
cgcgcgcagatggttgaagaggtacaacgacatgccctgcagcgcgctgaagaggagcgc
gctcgcgaggatgccgaattgaccaacgactctgagaccggtgaccgggtcaagcgtaag
aagaagcctactatcaagcgcaagaagaagggcggggacgacttcatcgcggatgaagat
gaaggtcttgctgcgcacagtgcggccgagagcgagggcgagacggcaccgaagaaacga
cgtcgcttggaacgccgatcgggagggaaggcccaggctgccaagtctgagaagcctggc
aagtacaagagcagtgagatggtggttgactctgatgacgaagaggctgctaggtctgcc
ggcgaagacaaggatgatttgtttggagatgacgacgacccggccgaagaagctgcgccg
cgtcgtcgtggcaaggcctctcgtcggattgctgatgatgacgaggacgaggacgaggaa
gaagaagaagtgcaagctgaggtggaagctgagaagtacggaaatgaagacaacgacgat
gaactgttcggcgaggacacggagatgcaggagtga
DBGET
integrated database retrieval system
