Penicillium digitatum: PDIP_22860
Help
Entry
PDIP_22860 CDS
T04849
Name
(RefSeq) Non-repetitive nucleoporin, putative
KO
K14312
nuclear pore complex protein Nup155
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_22860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_22860
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PDIP_22860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DUF7234
Imm35
Motif
Other DBs
NCBI-GeneID:
26230608
NCBI-ProteinID:
XP_014537059
UniProt:
K9GY53
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MSYPTLPTNLPPATPQKPLPGAYFQTPAPATARPLPSKSPLQTQPQTPMPKLPPAASKTK
NQTVSTEERGARTINSSLQSESRYPDLDSYLSQGSSSEYNIPISQSWAPFQKVKMYDIPD
QIFDQYNRAQVSTSMGLFAELNHAWVAIDNALYIWDFTHPNPQLVGFEEQPNSINAVKLT
KPRPGVFLPAITHLLVIATTADIILLGMGYENTPSGGRQVSLYHTGMSVAVRGLDINVFA
ASASTGRIFFGGSSDTDVHEVTYQQEERWFQGRCGRVNHTSSRLSAFRPSMSLTNLAQSA
AEHVVQMALDDSRNLLYTLSSASTIRVFHMGPEGTLTLAITKRALDIYSNIGHIITSNET
LNPRVKIVSISPVPATEASRYHLVATTATGYRIYLSATGSNSWAPASTNTSPPTSMQALH
VKTPPVDISPGVSGVASSNSLVSPLGAVLPSAGQINTLSPTRLAERYSPGYFFCFTTKDP
QQKIDTLFISTPDSGRVAQYQESSVSGKAAESAIIVDLGGKAEDIGLVSAPSPVTNELAV
QFDHPAAEIAILTNSGVHIIRRRRLVDIFAALLRGSGNPHEGLSGEIQNFLRAYGRSEML
ATALAVACGQGMEISPDQRLTRITDPDILAAARQAFITQGGRAHLNENAIADGSTSALDA
VQPSPRHTGIALYISRLLRSIWKEKIAKVGNGPNGAQSVSASVSSSKLQTVQHDLLSLAE
FFKVNKTFIDGLNGPDALARVNSKQEEVALQAEHRALHSLVQLVSHTIEGISFILVLFDE
RVDEIVAALPADSKARFLSLTFEELFSSSKGHDIAKELVKGIVNRNIAKGSNVETVADAL
RRRCGSFCSTEDVVVFKAQEMLKRATEAGANTELGRNLLNESLHLFQQVAECLPMDYLVS
AVDNFIVNQFFAGAIQLALNVAARSDKSNLAYSWIMDQRPEQVLIPLIPFGSQREHMLTT
TQDPRKEYFYFRKQCYDLIFKVVLAVDTLAASDPGLIDGQLTMIAKRQNEAYGVISDSTD
EVFLTSLYDWYLEQGWNDRLLQTQSPFVVTYLQRKSNDDLGHADLLWRFYAQSQRFFETA
QVQFHLANSAFVLPLSRRIEYLGQARANASIFTPDVGRQSRQRLLQEISNLIDVANIQDD
LLQRLKDDERILPERKPEILREVDGPVMDISTLFNKYADSASYHDICLQIFYQADHRNAA
DIKSTWQHLIQGVHDATVQRGSPQPYEAVIDKVRSLGSRLRMSETVFPIRELVPMLERYA
LEFQRNVGPATWVVDLFIDLGVAHESLYAVLETMYYTDEAPFHGSNRRFIAHDLLYLLSG
WFHETVRLGGMVFGSDIVAERVSEMLLILQQSGVISGEQLEIAHDLRSRIDDILR
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatccaactcttccaacaaatctccccccggcgacgccgcagaaaccccttcct
ggagcttactttcagaccccagcgccagctaccgcacggcctcttccttcaaagtcgcca
ttgcagacgcaaccgcagacgcccatgccaaagctccctccagcagcctcaaagaccaag
aaccagacagtgagcaccgaggaacgcggggcccggacgatcaatagcagcctgcaaagc
gaatcgcgttatccagaccttgacagctatttgtctcagggttcctcgtctgagtacaac
atcccgatatctcaatcatgggcaccattccaaaaagtcaagatgtatgatatccccgat
cagattttcgatcaatacaatcgcgcacaagtttcgaccagcatgggtctgtttgccgag
ttaaatcacgcgtgggtcgcgattgacaacgcattgtacatttgggatttcacacacccc
aacccacaattggtgggattcgaggaacagcctaacagcatcaatgctgtcaagctgacc
aaaccgcgcccgggggttttcttgcctgcaatcactcacttgctggtcattgcgacgact
gcggacattattctgctgggaatgggctatgagaacacgcctagcggaggtcgacaagtt
tctctgtatcacacggggatgtcggtagcagtccgtggcttagatataaatgttttcgca
gcatcagcatccactggacgcattttctttggaggatcatctgacaccgatgtgcacgag
gtcacttaccaacaggaggaaaggtggttccagggccgctgtggcagagtcaatcacacc
agctcacgtctatcggcattcaggccctcgatgagcctgacaaatcttgcacaaagcgcc
gccgagcacgtagtgcagatggcacttgacgacagccgaaacttgctatacacgctctcc
tccgcgtctacaattcgcgtcttccacatgggacctgagggcactttgacactcgcaatc
actaaacgcgctctggatatctactctaacatcgggcacatcatcacctcaaacgaaacc
ctcaaccccagagtcaagattgtatccatcagtccggtgccagctacagaagcctcacga
tatcatctagttgcaacgacggcaacaggctaccgtatctatctcagcgccactggttca
aacagttgggcgcctgcatcgaccaacaccagcccccccacaagcatgcaggcactgcat
gtcaaaacaccgcccgttgatatttcccccggcgtgagcggagtggcatcttccaactca
cttgtttcacctcttggcgcggttttaccttctgctggtcagattaacacactttcacct
actcgtcttgcagaacgatattccccaggctatttcttctgttttaccaccaaggaccca
caacaaaagatcgatacccttttcatctcaactcccgactctggccgggtcgctcagtac
caggaaagctcagtcagtggtaaagccgctgagtcggcgatcattgtcgacctgggaggc
aaggccgaggacattggtctggtttcggcaccttcaccggtgacgaacgagttggccgtt
caattcgaccacccggctgctgagatcgcgatcttgactaatagtggagttcatatcatt
cgtcggcgtcgtctcgtggatatctttgcagctttgctccgcggcagcggcaatcctcat
gagggactgagcggcgagatccaaaatttccttagagcatatggacggagtgagatgctg
gcgactgctctggcggtggcttgtggccagggtatggagatttcccctgaccaaagactg
accagaattaccgatccggacatcctggcggcagcacgtcaggccttcatcactcaaggt
ggtcgagcccatctgaatgaaaatgctattgcggatggctcaacatccgctcttgacgca
gtgcagccctctcctcgacacacgggtattgcactttacatttcccgtctgttgcgatct
atctggaaggaaaagattgccaaggtgggtaatggacctaatggcgcacaatccgtttct
gcgtccgtgagttccagtaaattgcagactgtacagcatgatctcttgtcactggcggag
ttcttcaaggtgaacaagacttttatcgatggactcaacggtcccgacgctcttgcccgg
gtaaatagcaagcaagaagaagtggcgctgcaagccgagcaccgcgcattacactcactc
gttcagttggtgtcacacacgatcgaaggcatctcattcatacttgttctattcgatgag
cgggttgatgagattgtggcggctttgccagccgattcgaaagcaaggttcctcagcctc
acctttgaggagctctttagctccagcaagggacatgacattgccaaggagcttgtgaag
ggcatcgtcaaccgcaacattgccaagggctccaacgttgagaccgtggctgatgcactt
cgacgacgatgtggcagtttctgcagcacagaagacgtggtggttttcaaggcacaagag
atgctgaagcgtgcgactgaggccggtgccaatacggaattgggtcgcaacttgctcaac
gagagtctgcatctcttccaacaggtggccgagtgcctacctatggattatctggtttca
gctgtggataattttattgtcaaccagttctttgcaggtgccatccagcttgccctcaac
gttgctgctcgttctgacaagtcaaaccttgcctattcctggattatggatcagcgtccc
gaacaggtgcttatcccccttattccctttggatcccagcgcgagcacatgctcacaacc
acccaggacccccgcaaggaatacttttatttccgcaagcagtgctacgatctcatcttc
aaagtcgtgcttgcagttgacacactggctgcatctgatcccggtctcattgatggccag
ctgacgatgattgctaaacgccagaacgaggcctatggcgtgatctccgattccaccgat
gaggtgttcctgacgagtttgtacgactggtaccttgagcagggctggaatgatcggttg
ctgcagacccagtcgccatttgtggtcacctatctccaacgcaagtcaaacgatgatcta
ggccacgctgatctactctggcgtttctatgcccagtcccaacgattcttcgaaactgcc
caggttcagttccatctggccaatagtgctttcgtgttgccactgagtcgtcgtattgag
tatcttggtcaagcccgcgccaacgcttcgattttcacaccggacgtcgggcggcagtca
aggcaacggttactgcaagagatttcgaacctcattgacgtggccaacattcaggatgac
cttctccagagactcaaggatgacgagcgcattctccccgagcggaaacccgagattctg
cgtgaggtcgatggaccagtgatggatatcagtacactattcaacaaatacgccgactcc
gctagttaccatgacatctgtctccaaatcttctatcaagccgaccatcgcaatgcggcc
gacatcaagtcaacttggcaacacctgatccaaggagtccatgacgccaccgttcaacgc
ggctcaccgcaaccttacgaagcggtgatcgacaaagtccgcagcctcggcagtcgcctg
cggatgtccgaaaccgttttccccattcgtgagcttgtccccatgctggagcggtatgca
ttagagttccagcggaacgtcggcccagcaacctgggtggtagatttgtttatcgatctt
ggcgtggcgcacgaatctttgtacgcagtactggagacgatgtactacaccgacgaggcg
cccttccacgggtcaaaccggcgttttattgcacacgacctgctgtacctgctgagtgga
tggttccatgagaccgtgcgcctgggcggcatggtttttggctcggatatcgttgccgag
cgtgtttctgagatgctgctgatcctgcaacagagcggtgtcatcagtggggagcagttg
gagattgctcatgacttgcggtcacggatcgatgacattcttcgatga
DBGET
integrated database retrieval system
