Penicillium digitatum: PDIP_22900
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Entry
PDIP_22900 CDS
T04849
Name
(RefSeq) Small nuclear ribonucleoprotein SmE, putative
KO
K11097
small nuclear ribonucleoprotein E
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_22900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_22900
03041 Spliceosome [BR:
pdp03041
]
PDIP_22900
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_22900
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PDIP_22900
Spliceosome [BR:
pdp03041
]
Complex A
U1 snRNP components
Sm proteins
PDIP_22900
U2 snRNP components
PDIP_22900
Complex B
U1 snRNP components
PDIP_22900
U4/U6.U5 tri-snRNP components
PDIP_22900
Complex C
U2 snRNP components
PDIP_22900
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PDIP_22900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
26230612
NCBI-ProteinID:
XP_014537063
UniProt:
K9GC78
A0A7T6XPL3
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MAGRKTLLAPIHCIFGFLQKRIPVSVWLYEQLAFRIEGTIRGFDEFMNLVIENAVEVRLA
TKTEEEKRRPLGQILLKGDNVSLIQAM
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccgcaagacattgttagctccgattcactgcattttcggtttcttgcagaag
cgcatccctgtttcagtctggctgtatgagcagctcgctttccggatagagggaacgatc
cgcggcttcgatgagttcatgaatctggtcattgaaaatgccgtcgaagtgcgtctggca
actaagacagaagaggagaagcgcaggccgctcggccagattctcctcaagggagacaac
gtctctttgatccaggctatgtga
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