Penicillium digitatum: PDIP_23580
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Entry
PDIP_23580 CDS
T04849
Name
(RefSeq) DEAD/DEAH box helicase (Sbp4), putative
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_23580
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_23580
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
Pre-60S particles
Helicases
PDIP_23580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
26230680
NCBI-ProteinID:
XP_014536839
UniProt:
K9H2W1
A0A7T7BPG9
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MPPKSSSRAWDALTPPLSEWTLDAVASMGFTRMTPVQASAIPLFMQHKDVVVEAVTGSGK
TLSFLIPIVEKLLRLDQPLKKHHVGAIVISPTRELASQIHQVLLSLLEFHPASAAAIKPA
EEGAPRAKTSSSTLKVVPQLLLGGGTSPAEDLKLFLKNSPNVLVSTPGRLLELLSSPHVH
CPQASFEMLVLDEADRLLDLGFKDDLQKILGRLPKQRRTGLFSASISEAVDQIVRLGLRN
PVKIAVKVRGAGVEEKRTPASLQMTYLTTSPLHKYAILKQILSTVQPTPQKTIFFVSTCS
SVDYLATILPIILGDEFVLVPLHGKHQANVRQKNFNRFTTSTTPSILLTTDVAARGLDIP
SVDLVVQIDPPSDPKTFIHRCGRAGRAGRRGLSIVLVHPGREEDYVSFLEIRKTPVAPYN
LPEFTDEQATAAIDKVRKAVLKDRAMHDKGQKAFVSWLRSYSKHQASSIFRVADLDWEAL
GKAWGLLKLPKMPEARSFEGDRTLGIKLEWSNYTYKDKQQEKRRKEAMAEAANSQGTEQG
SNKRRATESVAWSQKTEERDKKLKKKEFKKARKEKERWEQLPEDQKQKALETERMLEEIR
AKNEQQRLLNQASKAEEAKGDEFKGFD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaagtcgtcttcaagagcgtgggatgctctcacgcccccgctgtcagaatgg
accctcgacgcggtggcctcaatgggcttcacgcgcatgactccagtccaggcctcggcc
attcctctgtttatgcaacacaaagatgtggtggtagaagctgtcactggaagtggaaag
acattgtcattcttaattccaattgtggaaaagcttcttcgccttgatcagcctcttaag
aaacatcatgttggagccattgtcatttctccaacaagagaattggcctcacaaatccac
caagttcttctctcacttttggagttccacccagcatcggccgcagccatcaaaccggct
gaagagggtgctcctcgtgcgaaaacctcttcatcaacattgaaagttgtaccacaactt
ctcctgggcggtgggacatctccggcagaagatttgaaacttttccttaaaaattcgcct
aatgtattagtttctacacccggaagattgttggagctgctttcgtcgcctcacgttcac
tgcccccaggcatcctttgaaatgcttgtcctggacgaggccgacagacttcttgatctt
ggatttaaggacgacctgcagaagatcctgggccggctacctaagcagcggcgtacagga
ttgttcagtgccagcatcagtgaggctgttgatcagatcgtccgacttggtctacgaaat
cccgtcaaaattgccgtcaaggtcagaggagctggcgttgaagaaaagcgcactccagcg
agtctgcaaatgacctacttgacaacctctccacttcacaaatacgccattctgaagcaa
atcctttccacggtccagcccacaccccaaaaaaccatcttcttcgtatcgacatgctcc
agcgtcgactatctcgccacaatactacccataatcttaggagacgaattcgtgctagtt
ccactacacggaaaacaccaagccaacgtccgccaaaagaacttcaaccgcttcaccacc
tccacaaccccatccatcctcctcaccaccgatgtcgctgctcgcggtctcgacatccct
tccgtcgatctagtagtccaaatcgacccaccttccgaccccaaaaccttcattcacaga
tgcggtcgtgccggtcgtgccggccgtcgaggcctcagcatcgtcctcgtccacccaggt
cgcgaagaggactacgtatcgtttctggaaatccgcaaaacacccgttgcgccatataac
ctacctgagttcaccgacgaacaggccacagcggcgatagacaaagtccgcaaagcggtg
ttgaaagaccgcgctatgcacgacaagggccagaaggcattcgtcagctggctgcgcagt
tacagcaagcaccaagcaagcagtatcttccgagttgcggatctggactgggaagctctc
ggcaaagcatggggactcctcaagctgccgaagatgcctgaagctcgctcctttgaaggg
gatcggactttgggcattaaacttgagtggtccaattacacatacaaggataagcagcaa
gaaaagcgccgcaaggaggctatggcggaggctgctaattcacaaggtactgagcaggga
tctaacaagcgccgtgctacggaaagtgtggcttggagtcagaagaccgaagaacgggat
aagaagctcaagaagaaggagttcaagaaagcacggaaggagaaggagagatgggagcaa
ttgccagaggatcagaagcagaaggctcttgaaacggagcgcatgctagaagagattcgt
gctaagaatgagcagcagcggttgttgaaccaagctagcaaggcggaggaagccaagggc
gatgaattcaagggctttgactag
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