KEGG   Penicillium digitatum: PDIP_25030
Entry
PDIP_25030        CDS       T04849                                 
Name
(RefSeq) Small nuclear ribonucleoprotein SmD3, putative
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
pdp  Penicillium digitatum
Pathway
pdp03040  Spliceosome
pdp04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PDIP_25030
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    PDIP_25030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdp03019]
    PDIP_25030
   03041 Spliceosome [BR:pdp03041]
    PDIP_25030
   03032 DNA replication proteins [BR:pdp03032]
    PDIP_25030
Messenger RNA biogenesis [BR:pdp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PDIP_25030
Spliceosome [BR:pdp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PDIP_25030
  U2 snRNP components
    PDIP_25030
 Complex B
  U1 snRNP components
    PDIP_25030
  U4/U6.U5 tri-snRNP components
    PDIP_25030
 Complex C
  U2 snRNP components
    PDIP_25030
DNA replication proteins [BR:pdp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PDIP_25030
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 26230825
NCBI-ProteinID: XP_014536660
UniProt: K9GCY7 A0A7T6XKM8
LinkDB
Position
Unknown
AA seq 117 aa
MGKLTSTIGIPIKLLNEAQGHVVTIEITSGVVYRGKLLEAEDNMNVQLKDITVTARDGRV
SHLDQVYIRGSHVRFFIVPDMLRNAPMFRTRGQRGRGVGLARGKATVQRARGQRGRG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgggcaagctcacctccacgatcggcatcccgatcaagctcctcaacgaagcgcagggt
cacgtcgtgacaattgagatcacatccggagtcgtctaccgggggaagcttttggaagcc
gaggacaacatgaatgttcagctcaaggacatcaccgtcactgctcgcgatggtcgtgtc
tcccatctcgaccaggtctacattcgcggcagccacgtgcgattcttcattgtacctgat
atgctccgtaatgctcccatgttccgtacacgaggccagcgcgggcgcggtgtcgggttg
gcacgtggtaaggctacagtgcagcgtgcgcgtggtcagcgcggccggggttaa

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