Penicillium digitatum: PDIP_26180
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Entry
PDIP_26180 CDS
T04849
Name
(RefSeq) RNA polymerase TFIIH complex subunit Ssl1, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pdp
Penicillium digitatum
Pathway
pdp03022
Basal transcription factors
pdp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PDIP_26180
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_26180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_26180
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_26180
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PDIP_26180
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PDIP_26180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
26230938
NCBI-ProteinID:
XP_014536773
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MADSDEEYVGEVTEDEDDLQVTRGDISRAKRKQRGGAEWELSRTWETLVEGADGTINSTV
EGLLEAGKRKRLLKDTTPLQRGIIRHLILILDLSQSMSEKDLRPTRYLLALRYAQEFVRE
FFEQNPISQLGVLGLRDGLALRVSDMSGNPTGHLTAIQALKMQDPKGLPSLQNGLEMARG
ALFHTPSHGTREVLFIYGSLLSSDPGDIHQTIDALISDKIRVGIVGLAAQVAICRELSLS
GADDGRDHTPGCLLTERIYKLVADDGISFSYSGVQSLALRMPFKALTRRLSLLTMQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccgacgaggaatatgtgggtgaggtaacagaagatgaagatgatttacag
gtgactcggggcgatatttcgcgagccaaaagaaagcagcgcggaggcgcagaatgggag
ctatccagaacctgggagacactggtggagggcgcagatggtaccatcaactcgactgtc
gaaggtctgttggaggctgggaaacgaaaaaggctcctgaaagatacaacaccactccag
cgcggtattattcgacatctcatcctaattctggatctttcgcaatccatgtccgagaag
gacttgcgacctacaagatacttgttggctctccgatatgcccaggaatttgtgagagaa
ttttttgaacaaaatcccatctcccagcttggtgtcctcggactgagagatggtctcgcg
ctccgagtcagtgacatgagtggcaatccaacaggacacctcacagccattcaagcgctc
aaaatgcaagatccgaaaggtttgcccagtcttcagaatggattggagatggcacgtggt
gctcttttccacacgcctagtcatggcactcgagaagtgctttttatatatggttccctc
ctttcctccgatcctggagacatccaccaaacgatagatgccttgattagcgataaaatc
cgggttggcattgtggggctcgcagcccaggttgctatttgccgggaactttcactttcg
ggagctgatgatggacgtgaccacacccccggctgcctactcacagaaagaatctacaag
ctcgttgctgatgatgggatttccttctcgtacagtggagtccagtccctcgctctgcgc
atgccattcaaagccctcacgaggaggttatctttgctcacgatgcaatag
DBGET
integrated database retrieval system
