Penicillium digitatum: PDIP_26480
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Entry
PDIP_26480 CDS
T04849
Name
(RefSeq) Nucleoporin (Nup184), putative
KO
K14311
nuclear pore complex protein Nup188
Organism
pdp
Penicillium digitatum
Pathway
pdp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PDIP_26480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_26480
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PDIP_26480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
26230968
NCBI-ProteinID:
XP_014536109
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MAPVPEAYFPSLDKCFSGDVQLLSWKRAFLYTVDPESHTDDGGNIDVFFSHSESIRLLSD
GLKPFPSPSAKSKSEFESKTAAIHVETNGQSSFDLKEIKADALWLSKQAGIDEITALRLV
VLEWQNRPAARLTLGFSSEEATSLQSAAGTENLRGSLAGPNFASLLNQTARIGGVQSFEE
EEKRRLRLREVYLSEASHVVKTLRKLLALSLHDGISADSTASASLNRKLALRKIGSRIFQ
DKSAGDGLDRFLQECIGSIRSRLMSLEGDGGWLSAAEGSEELENIWRTSLVEEIVHIVQL
MFHQLQASVEFPTADLLLSWLQLMADYSFLETIQVPCQQPVEVLLPLQAFVSLTTLAFLK
PSLAISSIQNETHMRSSPQPYFWCKEKISQINEIFLNACGDLNTVNPAAFSWGLILYTIQ
EIAEDRRNARERALSRDSAVSYNEQTHNAGLSRASEQSEYEELLDSARTPQSTVEDAIPI
LTSEALKESAFNTVIALASKTGSMSAVDDGLTTRWVRLSLLDLVRIAVIFLDYSPEIVGS
VLAILSNDDSELSRDSDSLGPASDPKSLFAKDQNLMDSVFRVARSRFPYETAPFLQLCRA
LVSGQSLNEEGLPAILGEVENMESFTQIVSPTFQGYATIREDENADFVSLLQPLPMFETL
SQNRLIESEPSNAVIVSSSSEIPRLTVGQVISDSKPAVIMWEHRYSCLSFLGSWLEEWSE
TGGHSPGWTDDTATEIIALLTDLITNSETQRSGEASGKRILEMASDGLSKQGDIISVIFD
IFERNLHTIGTRGDLGKSLDATMACLRFIKALLKILPNRVWPFLGRSSLIGSDGKGGIMT
TIVSAMEIPSGEYPFLLSCVDLVETVIDDAASRAVLRKSPGSVSSKSSIAFDWSAGIPSH
VMRTIMLNFTRTMVEIFNSSGNWRFNLPEQRFKINSMLATSFERILYYAFGINDSPKLES
KVTGVFSTSAAYILDMLRPRSTADLSFNPILRLIAEGLQTPPTLHLRYLTLFENQVKSTL
RLCIKLVQAAQLAEQPGSLLEEQLFKASPVLVKLYALHDSYRLQVVSLLEILISSAASNP
DNEPPSLVGHLGAESSCLFLDVLSQLDMPMCDRPLLLAVWQLLSTFVSKRQQWLAVFILT
GSSPRQTLKKEPTSGGLSMRSVPFLKMALEKLSQIDQQEPQVALALLEFVSRAQENWPWA
TSHLSKHPQFFSSIINHVSKLKISSLPVMDQIHATRIAAVVADLCAVYLHSAKEVGDRSF
IKTLIPLVSWYAKDAVEVSAYNSSLHANLKKNFEMRYSGCKIVDFKRTPLEVRNLGRDYY
YDLSMGDKLLSYDFAWAGTKNRGFAEEFERANINLSLVEAQVSLLQSWKFFAIEHCADFM
PDTEVRKSMALVAQSCLKANLSSGPPEAIFERIQQARVDFAQALLQRLVEVQARGAEVFQ
LLEITWKTLRSRHLTYEDALISDDTEYFRSLLNVLFLSLQFHLDSPSRSAPEAINKKAEI
SSDLTVIVEIVKTIVAQGFKSLTNYLHETPERCAPKDFAIIIAILQTCLQVKNADRLYEH
IVYHIEEHDTARHATTLFSWADQLAVAGDPVYAELSISILVKMSTLPMLAEHLAVEAVLM
KLSTCRLTSILCQKKSFGPFDPVSRLYAIWTGGFLPLCLNMLYSVMRTAPEVAAFLNQFE
SRLTRATEAFSSHMAVSSVPTSKWISLSMVSEAYSLALISFILDRLREAGASAGVDTHAV
QDLKWDRVQVKEDIEELLGRRAALRPRIVATNEKELEWSRQKPVDSTSGAENRLEEKIVS
QMKAAVTCLGGEDS
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgtcccggaggcctatttcccgtccctggacaagtgcttctccggggacgtt
caactcttgtcctggaaaagagcttttctctacaccgttgatcctgaaagtcatactgat
gatggaggcaatattgatgtcttcttttcgcactccgaatccattcgcctactctctgac
ggcctaaaaccatttccctctccttccgcaaaatcaaaatccgaattcgaatccaaaact
gccgcaattcatgttgagaccaatggccaaagctcttttgacctgaaggagatcaaggcc
gacgcgctgtggttaagcaagcaagccggaatcgacgagatcactgctctgcgcttagtt
gtattggagtggcagaaccgtccagcagcgcgcctcacacttgggttttccagcgaggaa
gcgaccagtttacagagcgcggccgggaccgagaatctgcgaggctctctagccggaccc
aacttcgccagcctattgaaccaaacagctcgaattggcggtgtccagtcattcgaagaa
gaggagaagaggcgtctgcgactccgcgaggtgtatctctccgaggcaagtcatgtagtg
aagacactccgcaagttgcttgctctgtccctacacgatggtatttcagccgactcgacc
gcctcggccagtctcaatcgcaaacttgctttgcgaaaaatagggtccagaattttccaa
gacaagtcagctggtgatggattggaccgatttcttcaagaatgcattggctcgatacgc
agtcggctaatgagtttggaaggggacggtggctggctcagtgccgcagaaggcagtgag
gaactggagaacatatggagaacaagtctcgtggaggagattgttcacatcgtgcaacta
atgttccaccagcttcaagcctcggtggaattcccaactgcagacctcctattgtcctgg
ctccaactaatggctgattatagcttcttggagacaattcaggtgccttgtcagcaaccc
gtggaagtgctgttgccccttcaagctttcgtgtcactcaccacattggcgtttttaaaa
ccctctctcgccatctcttctattcagaatgagacacacatgagatcatcgccccagcct
tatttctggtgcaaggagaaaatctctcaaataaatgagatctttctgaatgcatgcggc
gatttgaacaccgtgaaccccgcagccttttcatggggtctgatcctgtataccattcaa
gagatagcagaagacaggagaaacgcaagagagcgtgctctgagccgtgactcggctgtc
tcgtacaacgagcaaacacataatgcagggttatctcgagcatccgagcagtcggaatat
gaagaattgcttgacagcgccagaaccccgcaaagcactgtcgaagatgctattcccatt
cttacatccgaagccctcaaagaatcagcatttaacactgttatcgcactggctagtaag
accgggtcaatgtcagccgtcgatgatggcctgacaacccgatgggtccggctgtcactt
ctcgaccttgtccgaattgctgtaatcttcttggactactctccagaaatcgtggggtca
gtcctggctatcttgagtaatgatgacagcgagctgtcaagagactcagattccctaggg
cctgccagcgaccctaaatctctcttcgccaaggatcagaatttgatggacagtgtcttt
cgcgttgcacggtcccgtttcccttacgaaacggcaccatttttacagctctgtcgtgct
ctcgtcagtggacaatctttgaatgaagaaggcctgccggctattcttggggaggtggag
aacatggaatcctttacacagattgtctcgcccactttccagggctatgccaccattcga
gaggatgagaacgccgattttgtatccctgctccaacccctccccatgtttgaaaccttg
tctcagaaccgtctcatcgagagtgaaccaagcaatgctgtaattgtcagcagttcttcc
gaaattccacgcttaaccgttggtcaagtcatttccgattcaaaacccgcggtcatcatg
tgggaacaccgatactcttgcttaagttttctaggaagttggcttgaagaatggagcgag
accggcgggcactcacctggatggactgatgacactgccacggaaatcatcgctctcttg
acagacttgataactaactccgagacacaacgttccggcgaggcaagcggcaagagaatc
ttagagatggctagtgatgggttgtctaaacagggtgacataatttccgtgatcttcgat
atctttgagcgcaatttgcacactatcggcacccgaggagatttgggcaagtctttggat
gcaaccatggcatgtctgcgctttatcaaggcacttctaaagatcctgccaaatcgagta
tggcctttccttggtcgtagcagtctcattgggtccgacggcaagggaggcatcatgaca
acaattgtttcagcaatggaaatcccttccggcgagtatccgttcctcctgagctgtgtc
gacctcgtggaaactgtcatcgatgatgcggcatctcgagcagtattgcgaaaaagcccg
ggcagcgtgtcaagcaaatcatccattgcgtttgattggagtgccggtatcccatctcac
gtcatgagaaccatcatgttgaacttcacacgcacaatggtggagattttcaacagcagt
ggaaattggaggttcaatctaccagaacagcggttcaagatcaactcgatgcttgccact
tcgtttgaacgcattctgtactatgccttcggaatcaacgacagcccgaaactagaatct
aaagtcaccggcgtcttctctacatccgcagcgtacattctggacatgctgcgccctcgg
tcaaccgccgatctatccttcaatccaattcttcggctgattgccgagggtctccagact
cccccaacactccacctcagatatcttactctctttgagaaccaggtgaaatctacacta
cgtctctgcatcaaacttgtgcaggcagcccaattggcagaacaacctggctcgcttctg
gaggagcaattgttcaaggccagtccagtcctggtcaaactctacgcgctgcatgattca
tacaggctgcaagtcgtgtcccttctagagattctgatctccagcgctgcttcaaatcca
gataatgagcctccttcccttgttggccaccttggagcagagtcatcctgcctgttcctc
gatgtgctgtcacaactagacatgccgatgtgtgatagacctctactccttgcagtatgg
cagctgctatcgacatttgttagcaagcgccagcagtggcttgctgttttcattctcaca
ggatcatctcctcgccagaccctgaagaaggaacccacctctggagggttgagtatgagg
agcgtgcctttcctaaaaatggcacttgagaaattgtctcagatcgatcagcaagagccg
caagtagctctggcgttgctcgagtttgtttctcgtgcgcaagaaaattggccatgggcc
acctcccatctgagcaagcatccccagttcttcagcagcattattaatcacgtctcaaag
ctgaagatctcttctctgccggtaatggatcaaatccatgccacgcggattgcagccgtt
gtcgcagacttgtgcgcagtctacctgcactctgcaaaggaggtaggtgacagaagcttc
ataaagaccttgattccattagtgtcgtggtatgccaaggatgcagttgaggtttcagct
tacaactcctcattgcatgccaacttgaagaagaactttgagatgcggtattcgggctgc
aagatcgttgacttcaaaaggacacccctcgaggttcgtaacctagggcgggattactac
tatgacttgagtatgggggacaagctgctgtcatacgactttgcctgggctggcaccaag
aaccgtggctttgccgaggagtttgagcgcgccaacatcaatttgtctcttgtcgaggcg
caggtgagccttcttcaaagctggaagtttttcgctatcgaacactgtgccgattttatg
cccgatactgaagtccggaagtcaatggctctggtagctcaaagttgtttgaaggccaat
cttagcagtggccctccagaagccatcttcgagcggatccaacaagcgcgcgttgatttc
gcccaggcacttctccagcggcttgtcgaagtacaggctagaggcgccgaagtcttccag
ctgctcgaaatcacctggaagacactgcgatcccgacatctgacatatgaagacgctttg
atcagtgatgataccgaatacttccggtctctccttaacgtactgttcctttcacttcag
ttccacctggacagcccctctcggagtgcccctgaagccatcaacaagaaggctgagatt
tcttcggatctgactgtcatcgtggaaatcgtgaaaacaatagtggcccagggcttcaaa
tccctcaccaattatcttcatgagacaccagagagatgcgcaccaaaagatttcgccatc
atcattgcgattctgcagacatgcttacaagtgaagaacgccgatcgcctctatgagcat
atcgtgtaccacattgaggaacatgacaccgctcgtcatgcgactacgctcttctcctgg
gccgaccaattagccgtggcaggcgaccctgtgtacgcagagctcagtatctccatcctg
gttaaaatgtcaaccctgcccatgcttgcagagcacctggctgtggaggctgtcttgatg
aaactgtccacctgccgtcttacaagcattctctgccaaaagaaatcattcggacccttt
gacccagtttctcgactgtacgccatctggactggaggattccttcctctgtgtctgaac
atgctctacagtgttatgcggaccgcgcccgaggtcgctgcgtttcttaaccaattcgaa
tcgcgtctgacccgcgcgacagaagcattctccagccacatggccgtttcctctgttccg
acatccaagtggatcagcctcagcatggtctccgaggcctactcgctcgcgctaatctcc
ttcatcctggaccggctccgtgaggcgggtgccagtgctggtgttgacacacatgctgtt
caagatctcaaatgggatagggtgcaggtcaaggaagatattgaggagctgctcggtcga
cgcgctgctctgcggccacgcattgttgcgactaatgagaaggagttggagtggtcccga
caaaagcctgtcgactcaacttccggggccgagaaccgactggaggagaagattgttagt
cagatgaaggcagcagttacctgtttgggtggggaagattcatga
DBGET
integrated database retrieval system