Penicillium digitatum: PDIP_30050
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Entry
PDIP_30050 CDS
T04849
Name
(RefSeq) mRNA 3'-end-processing protein rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
pdp
Penicillium digitatum
Pathway
pdp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PDIP_30050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_30050
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PDIP_30050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
HAT
Motif
Other DBs
NCBI-GeneID:
26231325
NCBI-ProteinID:
XP_014536466
UniProt:
K9G716
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MADDEAEAAFFQAQALNTDSQSPTVQQEGDNSDAESDDYDPSLALGDQYSASFSENKQPD
VGPTDTALSDETEDSIPNPAVASDAEAGRTSDSPDLSQNPSLAESSTPVSASAAEAQPKT
RTIGGFEVDEDEDDEGDAEYEPPAVLGGEDVNAMPVTMSENPSSGNAMLNTSPDVSSHQA
EQAPASGPGVANSSYSSDAVLNIDPSSVPVQSHWAAQDLQSATMQNSTVPTSVPDSPASK
GRLAHDRVGMLEDRIREDPRGDIPAWLELIAEHRGRSRLDSARDTYERFLKLFPMAADQW
VAYASMESELNEFFRLEQIFNRTLLTTPSVQLWSVYLDYIRRRNPLTTDASGEARKTISS
AYDMAIQYVGMDKDSGNIWTDYVEFIRSGPGIVGGSGWQDQQKMDLLRKAYQRAIGVPTQ
AVNTLWKEYDQFEMNLNKLTGRKFLQEHSPSYMTARSSYTELQNITRDLIRTSLPPLPPV
PGSEGDVEYSAQADIWKRWIAWEKEDPLVLKDEDPAAYKSRVVYFYKQALMALAFLPEMW
FDAAEFCFLNDMEDAGTEFLKNGIDANPESCLLTFKRADRLEVTSDSEQDSAKRAAKVRE
PYDKLLDALYELINKARNQETLDVSRIEAYFTSLNAESQLQNDDEDDPEAKEREAAKTAQ
IDAVRKAHSVQINLISKTVSFAWISLMRSMRRIQGKGKPGEMAGSRQIFAEARRRGRITS
DVYIASALMEYHCYKDPAATKIFERGAKLFPEDEHFALEYLRHLLDINDTINARAVFETT
VRKLTSNPQNIHKAKPIFSFLHDYESRYGDLTQVINLENRMRELYPEDPALEQFANRYSN
SNFDPTSVRLILSPSQTKPKTIMSGISMEPRGSPMARYMDTSLNSPKRPYPTDEYDEDSG
RPRKFVRGESPMKSAQARRLDQPKRVQQLNGQTTSYRPQGSPAPLPREVVNLLSILPSAA
AYNITRLSPEKMIDLLRHVEIPSDISQIQIPQTAHGPGGGQTPGPNPYSGKIIINLSHNN
ILNMSSPGAYR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatgaagcagaggctgccttcttccaggctcaggccttgaataccgattcc
caatcccccactgtgcagcaggaaggtgataactcagacgcagaatcagatgactacgat
ccttcactggcattgggggatcagtactcagcctccttttccgagaataagcagcctgat
gtcggccccactgatacagctctctcggatgagaccgaagattccatccccaacccggcc
gtcgcctcagatgcagaagctggccgaaccagtgactcccccgacctttctcagaacccc
tcacttgctgagtcgtcgacccccgtgtcagcctctgctgctgaggcacagcccaagacc
cgaacaattggcggatttgaggttgatgaggacgaggatgacgagggtgatgcggagtat
gagccgcccgctgtacttgggggtgaagatgtgaatgctatgcctgtgaccatgtctgaa
aatcccagctcaggaaatgcaatgctaaacacttcccctgatgtatcatcacaccaagct
gagcaggcacctgccagtggaccaggtgttgccaatagttcttattcttctgatgctgtt
cttaatattgatccctcttctgttcctgtccaatcgcactgggctgcgcaagatttgcaa
tccgcaaccatgcagaacagtactgttcctacttctgtacctgactctccagcctcaaag
ggtcgtctggctcatgaccgtgtcggcatgctggaagaccgaattcgagaggatccccga
ggtgatatccctgcttggttggagttaattgccgagcacagaggccgcagcagactagac
agcgcacgcgacacctatgagcgcttcttgaagctgttccctatggcggccgaccaatgg
gtggcctatgccagcatggagtctgagctcaatgaattcttccgcttagagcagatcttc
aaccgaacgctcttgacgacccccagcgttcagctctggtctgtttaccttgattatatt
cgtcgtcgtaatccattgacaacagatgcctctggcgaggcaagaaagaccatttcatca
gcatacgatatggccattcaatatgttggaatggacaaggattccggaaacatctggaca
gactatgttgagttcatccgttctgggccaggcattgttggtggatctgggtggcaagat
caacaaaagatggacctactgcgaaaggcctaccaacgagctatcggcgtgcccacccaa
gccgtcaatactctctggaaggaatatgatcaatttgagatgaatctaaacaagctcacg
ggccgcaaattccttcaagaacattcgccgtcctacatgactgcacgcagctcatacacc
gagttgcaaaacatcacccgcgatttgattcgcacttcgcttccaccactgcctccggtt
cctgggtctgaaggcgatgttgaatactcagcacaagcagacatttggaagcgctggatc
gcatgggaaaaagaagaccctctagttctgaaagatgaagaccctgctgcttacaagtca
cgcgtggtgtacttctacaaacaggcactcatggcattggccttcttgcccgaaatgtgg
tttgatgcagctgagttctgcttcctgaatgatatggaagatgctggcacagagttcttg
aagaacggcattgatgcaaacccagagagttgtttgctgacattcaaacgcgcggaccga
ctagaggttacctcagattcggaacaagattccgccaagcgcgctgccaaggtccgggaa
ccatacgacaaattgcttgatgcactttacgaattgatcaacaaggctcgcaaccaggaa
accttggatgtttcacgcattgaagcttactttacttcattaaatgcggagagccaactt
caaaatgatgatgaagatgatcccgaagccaaagaacgagaagctgccaagacggcacag
atagatgcagtccgaaaggcccattccgttcagatcaaccttatctcgaagactgtctct
tttgcatggatttccctcatgcgttcgatgcgtcgaatccagggtaagggaaaaccagga
gaaatggcaggctctcgtcaaatctttgccgaagcccggaggcgaggccggattaccagc
gatgtttatatcgcgagtgctctgatggagtaccattgctacaaagatcctgcggccacc
aagatcttcgagaggggtgcaaaactatttccggaggacgagcactttgcgctcgaatat
ttgaggcatctgcttgacattaatgacaccatcaatgctagagccgtgtttgaaacaacc
gtcaggaaattgacatccaacccacagaacattcacaaggctaagcccatcttttccttc
ctccacgactatgaatctcgttatggtgacctcactcaagttatcaacttggagaaccgc
atgcgcgaactatacccggaagatcctgcgttggagcaattcgccaatcgttactcaaat
tcaaacttcgaccctacttcggtgcgactgattttgtccccgtcccagacaaagccaaag
actatcatgtcaggaatctccatggaaccccgcggttctcctatggccagatacatggac
acttctctcaactcacctaagcgaccttatcccactgatgaatatgacgaagactccggt
cgcccgcgaaagtttgttcgtggtgagtcgccaatgaagagtgcgcaagctcggcgtctc
gaccagccgaaacgagtacaacagttgaacggccaaaccacctcatacaggccccaggga
tctccagctcccctacctcgtgaagtggtgaacctcttgagcattctgccttctgcagct
gcctacaacatcacccgtctttctcccgagaaaatgatagacctccttcgccacgttgaa
ataccttccgacatttcacaaatccagatcccgcaaactgcacacggaccaggtggaggc
caaactccgggaccgaacccctactccggtaagatcattatcaatctctcccataacaac
attcttaacatgtcttctccaggtgcttaccgctga
DBGET
integrated database retrieval system
