Penicillium digitatum: PDIP_32240
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Entry
PDIP_32240 CDS
T04849
Name
(RefSeq) Small nucleolar ribonucleoprotein complex subunit, putative
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pdp
Penicillium digitatum
Pathway
pdp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDIP_32240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_32240
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PDIP_32240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Tricorn_2nd
Beta-prop_EML_2
Beta-prop_VPS8
Beta-prop_WDR3_1st
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
CON_HrpB
Motif
Other DBs
NCBI-GeneID:
26231544
NCBI-ProteinID:
XP_014535828
UniProt:
K9GRA6
A0A7T6XR32
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MPNVGLKNKPKRTTARSPFENTTANIRPDDSDVEMEDETSSDEDKVPEKDEAEKKLERML
FGDDEGFMGALKNQQDREAGMALTLHSDDESDASEDAEEGEGQDLAALADSDLFFLDSGA
PPTTDFIPSPETPSDAEDDEEEDEPAVWYDSDDERLAVSLASQARLRKLRNTEAEDVVSG
KEYVRRLRRQFTRLHPTPEWATPELKRRKTDSDSDAGSEEEIDSDNENENLSMQPLAKLL
QNASDLTRIEDNARSSGKRKLRQEVIDIQRLKDIGKLQPSSVDSLTFHPHYPLLLSSGPA
STLFLHHISPSAPAPNPLLTSLHIKHTPIHTSAFAAPTGNKIFASGRRRYFHIWDLDTGK
VDKVNGSSDRKEEQKSMERFKLSPCGRFVGLVGTARKGGGLINVLDANTAQWIAQVRVDG
RGGVADFAWWSDGEGMTVVSKNGEVSEWDGRAGRVVARWLDAGAVGTTVLSLGGRSGRTQ
LGGDRWVAIGSSSGIVNVYDRREWAAAYANASAAEKDSSTQSGIPRNPDPVRVLDQLTTP
ISHLVFAPDGQMMVMASRWKRDALRLVHLPTCTVYRNWPTSNTPLGRISSVAISPNSEQL
AVGNEQGGIRLWEIRG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacgtagggctaaagaacaagcccaagcggacgaccgcccggtctccattcgag
aacactacggccaacattcgcccggatgactcagatgtcgagatggaagatgaaaccagc
tcagatgaggacaaagttcccgaaaaagatgaggcagagaagaagctagagcgtatgctt
ttcggcgacgatgaggggttcatgggcgcattgaagaaccagcaggaccgcgaggctggc
atggctctcactctgcacagtgatgacgagagcgatgcgagcgaagatgccgaggaaggc
gagggccaagatttggctgctctagccgattcagaccttttcttccttgactccggtgca
ccccccaccactgatttcattccatcaccggaaaccccttcggatgccgaggacgacgaa
gaagaggacgaacccgcagtatggtacgacagcgacgacgagcgcctcgccgtgtcgtta
gcaagccaagccagactgcgcaaattgcgcaacaccgaagccgaagatgtggtcagcggc
aaggaatacgtccgacgactgcgcagacagttcacacgtctgcacccaacaccggagtgg
gccacgccggaactcaagcgccgcaagacggactcggactcggacgcaggcagcgaggag
gaaatcgactcggacaacgagaatgagaacctctccatgcagcctctagccaagcttctc
caaaacgcctccgacctgacgcgcatagaagacaacgcgcgctccagcggaaagcgcaag
ctgcgccaggaagtcatcgacatccagagactcaaggacatcggcaaattgcaaccctcc
tccgtcgactccttgaccttccacccgcactacccgctcctgctctcctccggaccagcc
tccaccctcttcctgcaccacatctctccctccgcgcccgctcctaaccccctcctcacc
tctctgcacatcaagcacacaccaatccacacgtccgccttcgccgcacccacaggcaac
aaaatcttcgcctcgggccgccgacgctacttccacatctgggacctggacaccggcaaa
gtggacaaagtcaacggctcctccgaccgcaaggaagagcaaaagtccatggagcgcttc
aagctctctccatgcggccgctttgtcggcctagtcggcacagcccgtaagggcggcggt
ctgatcaacgtcctagatgccaacaccgcgcagtggatcgcacaggttcgcgtcgacggt
cgcggcggtgtcgcagacttcgcctggtggtctgatggcgagggtatgacagttgtgtcg
aagaacggtgaggtctctgagtgggatggacgtgcaggccgtgttgtagcgcgctggctc
gatgccggtgctgtcggcacaacggttctcagccttggtggtcgctcgggccggactcag
cttggaggggatcgttgggtggcgattggttcttccagtggtattgtcaacgtttatgat
cgtcgcgaatgggcggctgcttatgcaaatgcttctgctgccgagaaggattcttcgact
cagtcgggtatccctcgcaaccctgacccggtgcgtgtgctcgatcagctcactaccccc
attagccatttggtctttgcacctgatgggcagatgatggttatggcgagtcggtggaag
cgtgatgctctgcgtcttgttcaccttccgacctgcacggtataccgcaactggcctact
tccaacacgccgttgggtcgcatttcttcggtggctatctcaccgaactcggagcagttg
gctgttggtaatgagcagggtggtatccgactctgggagattcggggatag
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