Penicillium digitatum: PDIP_33900
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Entry
PDIP_33900 CDS
T04849
Name
(RefSeq) Vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdp04131
]
PDIP_33900
Membrane trafficking [BR:
pdp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
PDIP_33900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_N
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
26231710
NCBI-ProteinID:
XP_014535994
UniProt:
K9G787
LinkDB
All DBs
Position
Unknown
AA seq
3164 aa
AA seq
DB search
MLEGVVANLLNRFLGIYVKNFDATQLNIGIWSGDVKLRNLELRREALDQLRLPLNVVEGH
LGELTLSIPWSNLRGKPVKVHIEDVFLLAAPREDADYDPEEEERRANVLKMERIESAELL
RERNAEGMSQEEQRRNQSFTQTMITAVVDNLQISIKNVHFRYEDSIASPGHPFAVGVTLK
ELSAVSTDGDWKPTFIQSDSDVTHKLAVLGALSVYWNTDATLLGTGRGSDIGADAQGIGR
TELMGKLKAAIDVDEGNQFMLRPVSGRAGLEMDKSGTYDRPAIKARLLFDELGFVLDDKQ
YRDALMLVDLFHYFIRHQEHKKIQPKSSPKEDPRAWMRFAGEAVLSKIHERNRRWTWGYI
KERRDDRIAYIALFKKSKKEEAFTPEETKEMQRLEAKLSYEDIRFWRSLARNQLRKENVG
VKKPAEQKSWSAWLWGAKKEESEETTMTEEQRQELYNAIDWDEKKAIAESVDVPREWVKL
QVNWSLRAGSFTLIQDPHGSANEVMKLVFDNFRAKALQRSDSYLLDLDLGGLKMYDGTTA
GSLYPQIVKVKDSPPEPTKVQELNEEDDDLASQTSADDLQDEDSLFHLQLEKNPLESDAD
TAVKVKLKSIEVIYNPRFLVGIVQFFEPPERHMESIGALLDTAGATVEGLRQQTRAGLEF
ALQEHKKVDAQFDIHAPLFIIPESITQPSLLCLIIDAGHASVNSELVDRQAMRDLQSKQK
RQYEEEDYKQLEHLLYDRFLIKLDSTQVLIGPGIEATKAQLYTNVESRNFHIIDRINVDF
VLEMCIVPNVTQLTRTRISGHLPELHASISDTKYKGLMKLIDIAIPQFEAGKSASDPITA
AIAKEEAAIATQARSSSFQPTVQRYLPVVDDDEEEVEVDSEQAKKTLDTPTNIHRREFEF
KFTVGRLRGSLFRADPHDPQRDQLLVELVAEGFALDFYMRPYDMVAEVILKSLSVDDYIE
ENPVPEFKRIISSKGFDADEDKDLFQLKMVRVKPESPELDSTYEGVAMNLDISVSTINLV
VTRKTLLTLLDFILLTFTNPQQPVEPNPETDKVIEGIAIVEEKPEQAGKIRIRANLKSIA
LILNNDGVRLATLSLNTADVGVFLVGSSMLIQSRIGSLTLVDDVNLGAAEDSDIRRLLTI
EGDNFADFKYETFDPKSDTYPGYDSEIYLRSGSIKINFLEEPYRKIINFLVKFGKMQAIF
NAARQAAASQANQLQENASRVRLDIIVKTPIVVFPRVMTDDRPRDTITAHLGEIYAKNEF
VPMEEGMDSLAVNVISTGVRNIRLTSKFYFEDGTSEELEMIQKVNLEFSICYLEHQANNS
RPDMEIEGSLSPINLRISQSQLKFLLELSKSIPAAFATDAEQQELEAMESLPSSVTEPTR
EATSKAVQAQNGTGTSADDSENTETWVRLDMIFKVDSVGLELILANDDRPVGHLEDSSLS
KFSLNDTRLKLRILTDGSLESELLIHSFSIRDSRKQDSNKFRNIMSLINNDVQQQFMASV
SISGGPEKHLIAMLTIDSPRIMFALDYLSALQSFSQSAFASDEPVEVVVEESESPEESES
GSDAAAISNKAITEASSGDNTAAAMTVSLRMNLVDAQVIMVANPAIPHSEAIVLGTKEVL
ISHQNVSTLQIQKVGMFLCRMDKFETSRLRILDDFTLEMSIDSRSQDKESALTSIEVHLE
PLVLRLSLRDILMAIQIVNKASEMRAQNGQQIESGEAKKIADTKSTNSRLANKTPSTIAK
RASRLSQGVGSLDQTTASQNTIVLRREEMSAKIDGIRVILIGDLHDLPLLDWSVKKFNVD
VRDWSSTLNADTNFETFLNVYNFSKSAWEPLIEPWQLGFHMAKEINPDVFSFDVYSHKTM
ELTVTSATIALASKSFQFLSTDQDVLSKPRGADAPYRIRNYTGFDLRVWADISAGGEGPA
AKLTDGEESPWRFEDSTAVRETLTPEGHGGVVGVKLEGSGFDSISRIPVVREGETIYALK
PKQENVLHRLLVEVKLGPDNVKYITFRSPLLIENNTQIPVELGIFSPRDGHLLKIEKILP
GDARPAPVGSAYLHSIVVRPDQGFGYDWSDERLFWKDLIKRPTRTVKCVSESGQQSPSFY
FQVNATFDSKDSLTNVYPYMRIRIFAPVEIQNLLPYDFKYRIYDKNTKKDWTNFLRKGGV
SPVHVVELSHLLLLSIDLQDTVFRQSEFAIVNGNAQEYRREHTLSLKDERGLQLKLQLHY
FNIPNSGGAFKVSVYSPYLILNKTGLPMDIQSKAFLQSARNAAGQGLRADPRDEGRALPY
MYSYANEDQRNRSILKVSDSAWSKPQSFEAIGSTFEVIFPDRQGRSEFHSGVSVAEGEGK
YKLTKVVTLAPRFILKSKLNEDLLVREPGSSNVLQLQNGQLVPLHFLRQVQEKQLCLCFP
GVNNQWSSPFSIANVGTVHLKLAKANQRQKLIKVDIVMEGATLFLHFSIESRNWPFSMRN
ESDMEFIFYQANPNVEDDDEDDQASGWRPIRYRIPARSIMPYAWDYPATKNKSLVLTCQG
KERHIKLAEIGNLIPMRIPPSQPGGYQKIIDINIAADGPTQTLVLSNFKASKSMYKQQKG
QSSQTGTNTGFEIKEMNSDVNFKAQLRLGGIGISLINQNLKELLYLTFREIEIKFRESRL
YQTLNTTIKWIQIDNQLYGGIFPILLYPSVVPKTGKEMEAHPIFHAMVTRVKDDSYGVLY
VKYATLLLQQMTLELDEDFVFAMLDFVKIPGASWAEEQEGKLCDEDLNIPEPQQADNGQD
VYFELLHLQPMQMDISFMRTERVNVEDEMQPSNPLMFFVNVMTMSMGNVNDAPVRLNALM
LENARVSFPSLVGNVRAHYTQEFLRQIHIILGSADFLGNPVGLFNNVSSGVAAIFYEPYQ
GLVMTDRPQELGIGIAKGATSFVKKSVFGFSDSMAKLTGSMSKGLAAATLDKEFQTQRRM
SKVRNRPKHALYGITAGGNAFATSLASGIGGLARHPLQGAEKEGIQGFLKGVGKGVLGLA
TKPAIGAFDLASNLAEGVRNTTTVFDAEGLDRVRLTRFIGTDGIVRPYSQREALGQFWLK
TTDDGKYFNEDYIAHLELPGRDMLVLLTYARIMLVRTKKLSTEWDIRLTDIQTISKERTG
MSITLKGGANGPFIPVQDESSRNWLYRQIAVAVNAFNEKYNARG
NT seq
9495 nt
NT seq
+upstream
nt +downstream
nt
atgttggagggagtggttgctaacctacttaatcggttcctgggaatctacgtcaaaaat
ttcgatgccacccagctcaacatcggaatctggtcaggcgatgtcaagctacggaacctt
gaactgcgccgtgaagcacttgatcagctacgccttcctttgaacgtcgttgaagggcac
ctcggagagcttacactatctatcccatggtcaaatttacgaggaaaaccggtgaaagtc
catattgaagatgtcttcctgctcgcggcacccagggaagatgcagattacgacccggag
gaggaagaaaggagagcgaacgtgctaaagatggaaagaatcgagagcgctgagcttttg
cgcgagcgtaatgcggaaggcatgagtcaagaggaacagcgccgaaaccaaagcttcacg
cagaccatgatcacagccgtcgttgataacctgcaaatttctatcaagaatgtacatttc
cgctacgaagactctattgcatctcctgggcatccttttgccgttggcgtcacactcaag
gaattgagtgccgtcagcacagacggggattggaaaccgactttcatccaatccgactcc
gatgtcacgcataaactggcagtcctcggtgctctctcggtttattggaatacagacgcc
acactgctcggaaccgggcgaggctctgatataggcgcagacgcccagggaattggccgt
actgagctgatggggaaactgaaagccgcgattgatgtggacgaaggaaatcaattcatg
ctgcgccccgttagcggccgtgctggactggagatggacaagtcaggcacgtatgatcgg
cccgctatcaaggcacggttgctcttcgatgagctcggctttgttcttgatgacaaacaa
tatcgcgacgcgttgatgctggtggatctgttccactatttcattcgccatcaagaacac
aagaaaatccagcccaagtcctcaccaaaggaagacccccgggcatggatgagattcgca
ggagaagccgtccttagcaagatccatgaacgcaacagacgctggacctggggctacatc
aaggagcgcagagatgaccgcatcgcgtacattgcattgttcaagaaatcgaagaaggaa
gaagctttcacacctgaagaaaccaaggaaatgcagagactggaagcaaaactcagctac
gaggatattcgattctggcgctcacttgcaaggaaccagctacggaaagaaaatgtgggg
gtcaaaaagcccgcagaacaaaagtcatggtctgcctggctctggggcgccaagaaagag
gagtccgaggagactactatgaccgaagaacaacgacaagagctgtataacgccatcgac
tgggatgaaaaaaaagctatcgcagagagtgtggatgtgccccgggaatgggttaagctc
caagtcaattggagtcttcgggctggtagcttcactctaatccaggatcctcacgggtcg
gccaatgaggtcatgaagctagtgtttgataatttccgagctaaagcactccaacgttct
gattcctatctccttgatcttgaccttggagggctaaagatgtacgatggaactactgcc
gggagtctttatccccagatcgtcaaggtcaaggattctccccctgaacctacaaaggta
caagagctaaacgaggaagatgatgatcttgcatcccaaaccagcgcagatgatcttcaa
gatgaagacagtttgttccatcttcagctggagaagaacccgctcgaaagcgatgcagat
acagcggtgaaggtcaaactgaagagtattgaggtcatttacaaccctcgattcctcgtg
ggaattgtccagttctttgagccacccgagcgacacatggagtcgattggtgctctcttg
gacaccgcaggtgccaccgttgaaggactgcggcagcaaacacgggccggcctcgagttt
gccttgcaagagcacaagaaagttgatgcgcagtttgacattcacgcgcccttgtttatc
atcccagaaagtatcacacagccaagtttgctttgcttgattatcgacgccggtcatgcc
agtgtcaacagcgagttggtcgaccgccaagcgatgcgagaccttcagtccaagcagaaa
cgacagtatgaggaggaagattacaagcaactagagcatctgctgtacgatcgcttcctc
atcaaactggactccacccaagtcctcatcggacctggcattgaagcaactaaagcgcag
ctctacacgaatgtcgagtctaggaacttccacatcatcgaccgtatcaatgtcgacttt
gtcctggagatgtgtatcgtaccgaacgtgacacagcttacccgaacacggatttccgga
catctgccagagcttcacgcatcaatctcagataccaaatacaagggcttgatgaaattg
attgatattgccatcccacaattcgaggcgggaaagtctgcctctgatccaattaccgca
gcaatagccaaggaagaagcagctatagctacacaagccagatcatcatccttccaacca
acagttcaacgttaccttcccgttgttgacgatgacgaggaggaggttgaagtagacagc
gaacaggcgaagaagactttggatactccgaccaacatccatcgccgagaattcgaattc
aagttcaccgttggccgtctccgtggctcactgttccgtgccgacccccatgacccgcaa
cgggatcagttgctggttgaactggttgctgaaggatttgcactggacttttacatgcgt
ccctatgacatggtcgctgaggttattctgaagtccttaagcgtggatgattacattgag
gagaatccggttcctgaattcaagagaatcatctcttctaaaggcttcgacgccgacgaa
gacaaggatctgttccagctgaagatggttcgggtcaaacctgagtctcctgagcttgac
tcaacctatgaaggggttgccatgaaccttgacatatcagtctctactatcaatcttgtc
gtgacaagaaaaacacttctcacgctcctagacttcatcctcctcacattcacaaatccc
caacagccggttgaacccaacccagaaacagacaaggttattgaaggaatagcaattgtg
gaagagaaacccgaacaagccgggaagattcgcatcagggctaatctcaagagtatagct
ctaattctcaataatgatggagtccgcttggcgactttgagtttgaacactgccgacgtc
ggcgttttcctcgtgggcagctcaatgctcattcagtctcggataggcagtctgactttg
gtcgatgatgtcaacttgggtgccgcggaggactctgatatccgacgccttttgaccatc
gaaggagataatttcgcggacttcaagtacgagaccttcgaccctaagagtgatacttac
cccggctatgattccgagatctatctacggtctggttcaatcaagatcaatttcctggaa
gaaccttaccggaaaatcatcaacttcctcgttaagtttggcaagatgcaagccattttc
aatgcagctcgccaagccgctgcaagccaggccaaccagcttcaggagaatgcctcgcgt
gtgcgacttgacatcattgtgaagacacccattgtagttttccctcgtgttatgacggat
gatcggcctcgagacactatcactgctcaccttggtgaaatctacgctaagaatgaattt
gtccctatggaagaaggaatggatagccttgctgtcaatgtcatctccactggtgtccgc
aatattcggctcacatccaaattctatttcgaagatggtacatctgaggagctagagatg
atccagaaggtgaacttggaatttagcatctgctatctggagcatcaagcaaacaactca
cgcccagacatggaaatcgagggttctctatctcccattaaccttcgtatttcccagagc
cagctcaagttcttgctagagctgtcaaagtcgataccggccgcgtttgccacagatgcc
gaacagcaagaactggaggccatggagtctttgccctcgtctgtgactgaacctactaga
gaggctacttcaaaggccgtccaggcacaaaatggcacgggaacatctgctgatgacagc
gaaaacacagagacttgggtgcgacttgacatgatctttaaggtcgacagtgtcggctta
gagcttatcttagcaaacgacgaccggcccgttggtcacctggaggactcgagtttatcc
aagttctctctcaatgacacgcgactcaagctgcgcatcttgacggatggctcattggag
tcggaactgctcattcattcgttctcaatacgtgatagccgcaagcaggactcgaataag
ttcagaaatattatgtctttgatcaacaacgatgtacagcagcagttcatggctagcgtc
tccatatctggaggaccagagaaacatctcattgcaatgctcactatcgacagccctcgc
attatgtttgctttggattatctgtctgctttacagtcattcagccaatctgcctttgct
tccgatgaaccagtagaagtggtggtggaggagagtgaatcacccgaagagtctgaatca
gggtccgatgctgctgcaatttccaacaaggctataactgaggcttcttcgggtgataat
acagcagcggccatgaccgtatcactcaggatgaaccttgttgatgctcaggtgatcatg
gtggccaaccctgccattcctcactccgaagctatcgtccttggcactaaagaagtcctc
atctctcaccaaaatgtgtcgactctacaaatacaaaaagtaggcatgttcctgtgccgc
atggataagttcgagacatctcgacttcgcattttggacgattttacacttgaaatgtcc
atcgacagtcgatcgcaagataaggaatctgctttgacctctattgaggtgcaccttgag
cctctcgttcttcgcttgtctctgcgtgatatcttgatggcaattcagattgttaacaaa
gcatctgaaatgagggctcagaatggtcagcaaatcgagagcggagaggcaaagaaaatc
gcggacacgaaatcaaccaatagtcgtttggccaacaagacgccctctactattgctaag
agagctagtcgcctgagtcaaggagttggaagcctggaccagacaactgcgtcacagaat
acaattgtccttaggcgcgaagagatgtctgccaagatcgacggaattagagtcatcctt
attggtgacttgcacgatctgcctttgctcgattggagtgtcaagaaattcaacgtcgat
gtgcgcgactggtcatcaacacttaatgctgataccaattttgagacgttcttgaatgtg
tataacttctctaagtcagcctgggagccgttgattgagccctggcagctgggattccac
atggccaaggaaatcaacccggatgttttctcgttcgatgtgtattcacacaagacaatg
gagcttaccgtaacatccgctacgattgcactcgcatccaaatccttccagttcctctct
acggatcaggatgtcctttccaagccacgaggagctgatgccccataccgaattcgcaac
tatactggatttgacctcagagtctgggccgatatcagcgcaggaggggaaggcccagcg
gcgaagctaactgatggtgaagaatctccatggcgatttgaagattccaccgctgtccgt
gaaacgctaacaccagaaggccacggcggagtggttggtgtcaaactggaaggcagtggc
ttcgatagcatcagtcgcattcctgttgtgcgcgagggcgagaccatctacgctctcaag
ccgaagcaagaaaatgttcttcaccgactactcgtggaagtcaaactgggacccgataat
gtcaagtacatcacattccgttcgccgctcctcatcgagaacaacacccaaatccctgtg
gaattgggcatcttcagccctagagacggccacttgttgaagatcgagaagattttgcct
ggcgatgcacgaccggctcctgttggatcagcgtatctccattctatcgttgttcgcccc
gatcaaggcttcggatatgactggtcagatgagcgactgttctggaaggacctcatcaag
cgacccacacgtactgtcaagtgcgttagcgaaagcggacagcagtccccttctttctat
ttccaagtcaacgcaacctttgatagcaaagattcgctaaccaacgtgtatccctacatg
agaatccgaatcttcgctcctgtggagattcagaacctgttgccctatgatttcaagtac
cgcatctacgacaagaataccaagaaggattggacaaacttcctgaggaagggtggcgtc
agcccagtccacgtcgtggagctgtcccacttgttgttgctcagcattgatctgcaagat
acggtcttccgccagagcgagtttgccattgtcaacggcaatgctcaagaataccgcaga
gagcataccttatctcttaaggatgagcggggtcttcaactaaagttacagctgcattac
ttcaacatccccaacagtggtggtgctttcaaggtttctgtttacagcccataccttatc
ttgaacaagactggccttcccatggacatccaaagcaaagcgttccttcagtctgcgaga
aatgctgccgggcaaggactcagagccgatccaagagacgagggccgtgcactcccatac
atgtactcttatgccaacgaggatcaacgaaaccgatctatcctaaaggtcagcgactct
gcatggagcaagccgcagagttttgaggctattggcagtaccttcgaggtcatcttcccc
gatcgccaaggcagatctgagttccactctggagtgtctgttgccgaaggcgagggcaag
tacaagctgaccaaagtggtcacacttgctccgcgtttcatcctaaagagcaagctcaac
gaagatcttctcgtgcgcgaaccaggatcctccaatgtactccagcttcaaaacgggcag
ttagtaccacttcatttccttcgccaagtacaagagaaacagctgtgcctctgcttcccg
ggcgtcaacaaccaatggtcttctccgttcagcatcgcaaacgttggaactgtgcatctg
aagttagccaaggcaaaccagcgtcagaagctgatcaaggttgatatcgtaatggaagga
gcaacccttttcttacacttcagtatcgagtctcgcaattggccgttttccatgcgcaat
gaaagcgatatggagtttattttctaccaagccaatccaaatgtggaagatgatgatgaa
gacgaccaagctagcggctggagaccgatccggtatcgaattcccgcgcggagtatcatg
ccgtatgcgtgggactacccggcgacaaaaaacaagtcgcttgtgttgacctgtcagggc
aaagagcgccacatcaagcttgctgagataggaaacttgatcccaatgcggattccacct
tcgcagcctggcggataccagaagatcattgacatcaatattgctgccgatgggcccacc
cagactctggtgctgtccaatttcaaagcatcgaagagtatgtacaagcaacaaaaagga
caatcttcccagactggcacgaacactgggttcgagatcaaggaaatgaattcggacgtc
aacttcaaggcccaacttcgtttaggtggcattggaatctcattgatcaaccaaaacctg
aaggaactgctgtatcttacattccgcgagattgagatcaagttcagagagtcaagattg
taccagaccctgaacacgaccattaagtggatccagatcgataaccaactctacggtgga
atcttccccatcttgctttaccccagtgttgttccgaagaccggcaaggagatggaagca
cacccgatcttccatgcaatggttacacgggttaaggacgactcgtacggtgttctctat
gtcaagtatgcgaccttgctattgcagcaaatgacacttgaactggatgaggacttcgtc
tttgccatgctcgactttgtcaagattccgggtgcttcgtgggccgaggaacaagagggc
aaactttgtgatgaagacctcaatattccagagccgcaacaggcagacaatggccaagat
gtgtacttcgagctccttcatctccagcccatgcagatggatatctctttcatgcgtacc
gagcgcgtcaacgtggaagatgaaatgcagccctccaacccgttgatgttctttgtcaac
gtcatgacaatgtcgatgggtaatgttaatgatgcacctgtccgacttaatgcgctgatg
ctcgagaatgcccgcgtctccttccccagcctggtcggcaatgttcgtgcacactacact
caagaattcctgcgccaaatccatatcattcttggttcagccgacttcttgggtaaccct
gttggtttgttcaacaatgtcagctccggtgtcgccgccatcttctatgagccatatcag
ggtctggtcatgaccgaccgtccccaagagctgggtattggtatcgcaaagggtgccact
agcttcgtaaagaagtccgtcttcggattctcagacagtatggccaaactcactggaagt
atgtccaagggtctcgccgcggctactcttgataaggagttccaaacccagcgccggatg
tccaaggtgcgcaaccgccccaaacacgcgctgtatgggatcacggctggtggcaacgcg
tttgcaactagtctagccagcggtatcggtgggttggcgcgtcatccactgcaaggtgcc
gagaaagagggtatccaaggatttctcaagggtgttggaaagggtgtccttggattggct
accaagccagcaatcggtgcattcgatcttgcgtccaatctggcagaaggtgttcgcaac
accactactgttttcgatgccgagggtctcgatcgtgttcgactcacccgttttattggc
accgatggcatcgtgcgcccctactcgcagcgtgaggctctcggacagttctggctgaag
accacagacgatggcaaatacttcaatgaggattacattgcccacctagagcttcctggt
cgagacatgctggtcttgttaacgtacgcacgcatcatgctggtgcgcacgaagaagctg
tcgaccgagtgggacatccgtcttacagatatccaaaccatctccaaggagcgcacggga
atgagtattacgctcaagggcggtgccaacggacccttcattcctgtccaagacgaaagt
tcacggaactggttgtacagacagattgctgttgctgttaatgctttcaatgagaagtat
aatgccaggggatag
DBGET
integrated database retrieval system
