Penicillium digitatum: PDIP_37520
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Entry
PDIP_37520 CDS
T04849
Name
(RefSeq) Small nuclear ribonucleoprotein SmD1, putative
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pdp
Penicillium digitatum
Pathway
pdp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PDIP_37520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdp03041
]
PDIP_37520
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_37520
Spliceosome [BR:
pdp03041
]
Complex A
U1 snRNP components
Sm proteins
PDIP_37520
U2 snRNP components
PDIP_37520
Complex B
U1 snRNP components
PDIP_37520
U4/U6.U5 tri-snRNP components
PDIP_37520
Complex C
U2 snRNP components
PDIP_37520
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PDIP_37520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
26232070
NCBI-ProteinID:
XP_014535584
UniProt:
K9G299
A0A7T6XK30
LinkDB
All DBs
Position
Unknown
AA seq
125 aa
AA seq
DB search
MKLVRFLMKCANETVTVELKNGTILHGTIVSVSPQMNTSLRAVKMTPKGRDTISLDTINI
RGSTIRYYILPDSLPLDTLLVDDAPKPKNKARKETDRGRGGGRGGPRGRGGRGGPPRGRG
RGRGF
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtccgctttttgatgaaatgcgccaacgaaacggtgaccgttgagctgaag
aatggcacaattcttcacggcactattgtgtccgtgtctcctcagatgaacacctctctc
cgggctgtcaagatgacccccaagggccgtgacaccatctctctcgacactatcaacatc
cgcggttccacgattcgctattatatccttcccgacagccttccccttgataccctcctc
gtcgatgacgcacccaagcccaagaacaaggcgcgtaaggagacagaccgtggtcgcggt
ggtggccgtggtggaccacgaggccgtggaggacgcggaggtcccccccgtggtcgtggt
cgcggacgcggattctag
DBGET
integrated database retrieval system
