Penicillium digitatum: PDIP_38020
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Entry
PDIP_38020 CDS
T04849
Name
(RefSeq) Sister chromatid cohesion and DNA repair protein (BimD), putative
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_38020
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_38020
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
PDIP_38020
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
PDIP_38020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_2
Cnd1
TPR_DNAAF5
HEAT
Adaptin_N
TOR1L1_N
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
26232120
NCBI-ProteinID:
XP_014535634
LinkDB
All DBs
Position
Unknown
AA seq
1491 aa
AA seq
DB search
MPSRSRPGPSEVEEDSGLCSLSFNQPLSWRVGRSAIPIADLLDRLQTLAQELRKLDQEEI
DKESLRKVSQELANGNLLAHKDKGVRAWATCCIVDVLRLCAPDAPFTRNQLKDIFTCIVS
SIIPALADPSNAYNAQHIYVLGSLAEVKSVVLMVDLDHPDSLIVPLFMGCFDIVSGSSKA
STGEEVAKNVEFDMTRVLVTVIDESLVLAPEVVDIIVAQFLRVDPRVLDNPNRKGKRPDA
PLDAKQDTLLLKDYPAAYNMAKAICQACPDRMTSHISQYFNNVIIDASVPAGQTNGSRHA
RKPNLDDSDEEGEDIKELSKAHRLIRELWRACPEVLQNVIPQIEAELSAESVALRLLATQ
TIGDLAAGIGVAGPPPPPPMDPTTYPPVSLLDYDKTIPQPNVLLTPVSPKPFSQVHSSAY
EAFLSRRLDKTPSVRAAWVTVVGRILSTSAGGSGLHESEEHSLVRNLASMLRDVDEKVRV
AAVDTVGQFGLSQIVHKLSMDGGCSSPDSVLAILAERVKDRKPHVREHAMKILARMWAVA
AGDIEQNTEPVVSLLKDAPSKIFDAFYTNDQEIHVLIDRVLFETLLPLSYPPIKTKLSRG
NSNQSQKQKGSQASEPEQETDVDKIRVRRILTLLRGLDEKARRVFFVMLARQLSMRSAVT
LYLEACEKYNGGVVDKDEEQIKTQLSKIIESLSKTFPDASRASADLWKFAKVHDRRCYQL
VRFAMAAVSDYRTVVKAMKELQRRVQSANNSPLLETLTPLVYRCGSMIFNRSHIPAIMSL
SRTDENGLANAAQEMLKQISSQNPEVLEAQVQEMCKDLEAQAPKASSAADSSAEDILKAC
AGFAKKLPAKLPKERKFLQALANYALYSSSPHSAKHAVSILMATADRREMYAKDLVHKCV
ENWTYGSDRFLTRLAALSQLNLLAPREADEESDAIISIAIKQILLTNRTPEPDSEYNWSE
TIDDETKAKEWALKIIVNRLHAKDGADNEDDFRAHAKPVYETLNKLVVGEGEISKKKDTP
AGQKSRLRLLAAKSLLKLCASSTICDGLLTPSDFNAVALVAQDPLVQVRGGFINHLKKKL
VQKSHLSHRWYIVPCLLAFEPVHSLKESTLTWLRSRAAYFAQQAQASGKRTEQTMVMELI
FSRLLSLLAYHPDYPSEDLDEATKLGDLTDFSQYILFYLSAVANEHNMSLIFHVGQRVKQ
FRDGITKSDEISTRLHTLSDLAQATIRRFAEIYSQQHKFGGAVGATNILQTYPGKMGVPS
SLFTSMSSHREAQDVADKNFLPDELDDLLDRIVRIAMKPKSNSAHASQGGSTKKRKPSLD
TNGKTSVAKKARKEKSSRPARKSTSSVSAAAKSKRKSKNDDGWSSDGGAEGTTPASSRRR
SVRGTAKPEVSYIDNDSDYADMEMAEWDEPNEKDDGEDDAEESENKEIHETDEGPELSEE
DKAEASEKEPTPPPAKKRGGRSTAAKGDAKKPGAKKPEAASLPSRRSSRRG
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcgctctcgcccaggtccttccgaggtggaggaagactcggggctttgcagt
ctatccttcaaccagccgctctcttggcgcgtggggcgctccgcgatccccattgcggat
ctcctcgaccgtctccagactctcgcgcaggaacttcgcaaactcgaccaagaggaaatt
gataaggaatcactacggaaggtgtctcaggaacttgctaatgggaacttgcttgcccac
aaggataagggtgtcagagcatgggctacgtgctgcatcgttgatgtgttgcgactatgc
gcaccagacgcgccttttacgcgcaatcaattgaaggatatattcacatgtattgtgtcc
tcgattatccccgctttggctgacccgtccaacgcctacaacgcccagcatatctacgtc
ctaggatctctcgcggaggtgaagagtgtggttctgatggtcgatcttgatcatccggac
tcgctaattgtcccgttattcatgggctgcttcgacatcgtgtcgggttcttcgaaagca
tccaccggtgaagaggtggctaaaaatgttgagtttgatatgacccgagtactcgtcacc
gtgatcgatgaatcgctcgtcttggcccccgaagtagtggacattatcgtcgcccaattc
ctccgagtcgacccacgagtgttggacaatcccaacaggaagggaaagcgaccagatgcg
ccgcttgacgccaagcaggacactcttctactgaaagactatccggccgcctataacatg
gccaaggctatttgtcaggcctgcccggatcgtatgactagtcacatcagccagtacttc
aataacgttatcatcgatgcatctgtgccagctggccaaacgaacggctctaggcatgcc
cgaaaacccaatctcgacgattccgatgaggagggagaagatatcaaggaattgagcaag
gcacaccggctgatccgggagctttggcgcgcttgtcccgaggtcctgcagaatgttatt
ccgcagattgaagcagagctctctgcagaatcagtggctctacgtttattggcgacccag
actatcggagaccttgcggccggaatcggtgttgcaggtcccccacctcctcctcccatg
gacccgacaacctacccgccagtatcactactggattatgacaagaccattccccagccc
aatgttttgttgactcccgtgtcccccaagcctttctctcaggtccacagctcggcctat
gaagccttcttgagccgtcgtctcgacaagacaccatcagtccgtgctgcctgggtcact
gttgtgggacggattctttcaacgtcagctggaggctctggcctacacgaaagcgaagaa
catagtcttgtcagaaatctggcctcgatgcttcgtgacgtggatgagaaggttcgcgtt
gctgcagttgatactgttgggcaatttgggctttcccaaatcgtccataagctaagcatg
gatggtggttgctcatcaccagactcggttcttgcaattcttgccgagcgagtgaaggat
cgcaaaccgcatgtgcgtgaacacgctatgaagattttggctcgcatgtgggcagtggct
gctggtgacatcgagcaaaacacggagcctgtcgtgtccctcctcaaagatgcgccatct
aagatatttgatgccttctataccaatgatcaagaaattcatgttctgatcgatcgcgtc
ttgtttgagacgcttttgccactttcttatccccctatcaaaacgaaactttctcggggc
aactcgaaccaatcacaaaagcagaagggtagccaggcgtctgaacccgagcaagagacg
gatgttgacaagatacgcgtccgccggattcttaccctgctccgagggctggatgaaaag
gccaggcgagtcttcttcgttatgttggctcgtcagttgtcgatgagatcggcagtgaca
ctttacctagaggcctgtgagaagtacaatggtggtgttgtcgacaaggacgaggaacag
attaagacacaattgtccaagatcattgaatcattatctaaaactttcccagacgcctcg
cgcgcatcggcagacttgtggaagttcgccaaggtgcatgaccggcggtgctaccagctg
gttcgcttcgccatggctgctgtgagtgattatcgcactgttgtcaaggccatgaaagaa
ctccagcggcgggtccagagtgcaaacaactctcccctactggaaaccttaactcctctt
gtgtatcgctgtgggtccatgatcttcaaccggagccacatcccggcgatcatgagtttg
tcccgaacagacgagaatggattggccaacgctgcacaggagatgttgaagcaaatttca
tctcaaaatcccgaagtcctagaggcacaggtccaagaaatgtgtaaagatctcgaggct
caagctcccaaggcttcctcggccgctgatagtagtgctgaagacattttgaaggcttgt
gctggtttcgctaaaaagcttccggctaaactccccaaagagcgcaagttcctccaggct
ctggccaactatgcgctttacagttcatcgccgcattctgcaaaacatgcagtctcaatt
cttatggcgacggctgatcgaagagagatgtatgcgaaggatctggtgcataagtgtgtt
gagaactggacgtacggatctgatcggttcctcactcgcctggctgctctgtcgcagttg
aacctccttgcaccgagagaagcagacgaggaaagcgatgctatcatttccattgccatc
aaacaaatcctcctcaccaaccgcacacccgaaccagactctgaatacaactggtcggag
acaattgatgatgagactaaagctaaagaatgggcattaaaaatcattgtcaaccgcctt
cacgctaaggatggagcagacaatgaagatgacttccgtgcccacgcaaagcctgtttac
gaaactctgaataaattggtggtcggtgaaggcgaaatctcaaagaagaaagacacccct
gcaggccaaaaatcgcgccttcgcctcctcgctgccaagtccttgctcaagctgtgtgct
tctagcactatctgcgacggtttgttgacgccgtctgatttcaacgcagtcgctctagtt
gcccaggatccacttgtgcaggtgcggggtggtttcattaaccacctgaagaagaaactc
gtgcaaaagtcacatctgagccatcgatggtacatcgtcccatgtttgcttgctttcgaa
cctgttcatagtctgaaagagagcacgcttacatggctacggtcccgagcggcatacttc
gcccaacaggcgcaagccagtgggaaacggacggaacagaccatggtaatggaattgatc
ttttcacgtctcctgtctttgctcgcctaccaccctgactacccgtctgaggatctggat
gaggcaacaaaactcggtgacttgaccgacttctctcaatatattcttttctacctctcc
gcagttgccaatgaacacaacatgtcattgattttccacgtcggacagcgcgtcaaacaa
ttccgcgatggaatcaccaaatcagacgagatctccacccgcctccacacactatctgat
ttggcgcaagcaaccattcgccggttcgctgaaatctactcccaacaacacaagtttggc
ggtgcggtcggcgcaaccaacatcttgcaaacctaccctggaaaaatgggcgtccctagc
tccctcttcacctccatgagcagtcaccgcgaagcccaagacgtcgccgacaagaacttc
cttccagatgaactagatgatttgctagatcgcatcgtccgaattgcaatgaagcctaag
agtaactccgcccacgcttcgcagggcggatcgaccaaaaagcgaaaaccctctcttgat
acgaacggcaaaacctctgtggcgaaaaaggcacgcaaggaaaagtcttctcgtcccgcc
cgcaagtctacatcttcggtcagtgcagcagccaagtcgaaacggaaatcaaagaacgac
gacggctggtcttccgacggaggcgctgaaggcaccacgcccgcttcatctcgcagacgt
agcgtccgaggcaccgcgaagccagaagtcagctatatcgacaatgatagcgattatgcg
gacatggagatggccgagtgggatgaacccaatgaaaaagacgacggcgaagatgacgca
gaggaaagcgagaacaaagaaatccatgaaaccgatgaaggtcccgaactttctgaggaa
gataaggccgaggccagtgagaaagaacccacgccgcctcctgcaaaaaagcgaggcgga
aggtccactgctgcaaagggcgatgctaagaagccaggggcaaagaagcctgaggcagcc
agcttgccttcgcgacgctcttcccgtcgtggataa
DBGET
integrated database retrieval system
