Penicillium digitatum: PDIP_38970
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Entry
PDIP_38970 CDS
T04849
Name
(RefSeq) Pre-mRNA polyadenylation factor fip1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pdp
Penicillium digitatum
Pathway
pdp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PDIP_38970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_38970
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PDIP_38970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
26232215
NCBI-ProteinID:
XP_014535729
UniProt:
K9G4J5
A0A7T6XJH2
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MDDEEDDFYDPVDAVPTMQSLNHTQNAAPGQPQESNYLEDDDEVEEEEDDDDDFNIITEA
PEGAPAPEASHPRHASLRQEPQRPSSADSSGLARSATPSATPRYETATPIPGHPAAAAAA
TARPSSEKPGSAYPAIHSSTIDVNANPIHPMTGKPIMSTDMDADFPSDDKPWRRPGSDLS
DYFNYGFDEFTWAGYCLKQQGLRQEVSSQKRQMDDMQAFMGMGMPPMPTAPGPAAPASAA
PPMAGMPGMPDMNPDMMQGMLASMMSQGLDPSNMDPMAFMQHAQSMMPGGGQQSQPGFGG
QPQGQGFNQGGQGQMGYGGYDQRGGYGGRGRGRRW
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaagaagatgacttttacgatcccgttgatgcggtgccgacaatgcaatcg
ctgaatcacacccaaaatgcagctccaggccaaccgcaggagagcaattacttggaggac
gatgatgaggtagaagaggaagaagatgatgacgatgacttcaatattatcacagaggca
cccgaaggcgcaccagctcccgaagcctctcacccacgccatgcaagcttacgacaagaa
ccacaacggccgtcctcagcagattcatcgggattagcaaggtctgcgacgccatccgcg
actcctcgatacgaaacagcgactccgatccccggacacccagccgcggccgcggccgcc
accgcaagaccctcctcagaaaagccaggatcggcctatccagccattcacagctctacc
attgatgtcaatgcaaaccccatccaccccatgacagggaagccgatcatgtccacagac
atggatgccgacttcccttccgacgacaagccctggcgccgacccgggtcagatctctcc
gattactttaactacggatttgatgagtttacatgggcaggatactgtctcaagcagcag
ggcctgagacaagaagtcagcagccagaagagacagatggacgacatgcaggccttcatg
ggcatgggaatgccccccatgcctaccgcaccgggccccgctgccccggctagtgctgcg
ccacccatggctggtatgcctggtatgccggacatgaaccctgatatgatgcagggcatg
ctagccagcatgatgtcccagggtttggatccatctaatatggatcccatggctttcatg
cagcacgctcagtcgatgatgcccggtggaggtcagcagagtcaacctggcttcgggggc
cagccccagggccaaggtttcaaccaaggggggcagggtcaaatgggctacggcggatac
gatcaacgtggaggttacgggggccgaggacgtggccgaagatggtag
DBGET
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