Penicillium digitatum: PDIP_39260
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Entry
PDIP_39260 CDS
T04849
Name
(RefSeq) UV-damaged DNA binding protein, putative
KO
K10610
DNA damage-binding protein 1
Organism
pdp
Penicillium digitatum
Pathway
pdp03420
Nucleotide excision repair
pdp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PDIP_39260
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_39260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdp04121
]
PDIP_39260
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_39260
Ubiquitin system [BR:
pdp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
PDIP_39260
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PDIP_39260
TCR (transcription coupled repair) factors
Cul4-CSA complex
PDIP_39260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
26232244
NCBI-ProteinID:
XP_014535758
UniProt:
K9GRZ1
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MAYVVPIHRASSIRHAVKLNFFSPDEECLVAAKASRLEFYTLTPDGIVLTVTRALNARVT
MLARLPAPTNSPTDHIFVGTDQYNYFTITWDRETNDIKTARTCVDIAEPSSRESQCAPRC
LIDPTGRFMTLEVYEGVIVVVPIVQPTKKRGRMSMAGSQPDFPLQVGELDKPTTSRIDEL
FVRSSAFLHSESSPWLALLYEDNQQKVRLRIRELDFTPGSSGTLADATFKEVQKLEGGEF
GQELDLGSSHLIPIPAPLGGLIVLGETSIKYIDDNANDVITRHLEEATVFVAWEKVDSQR
WLLADDYGRLFFLSFILNNLGEIDDWKLESLGKTARASVLVYLGGGMLFVGSHHGDSQVL
RLDGTSFEVIQTLSNIAPILDFTIMDLGNRTNESQTHEFSSGQARIVTGSGAFDDGTLRS
LRSGVGMEDLGVLGEMEHISDLWGLQTRSTGDYLDTLIVTFVDETRVFQFSPDGEVEELD
NFLGLSLTESTLLATRLQGGRILQVTEQRALVADLESGMVIFEWVPQDQKLITAVSTNED
HLVLVISGQIVASFDIRDNVQIIKLKDLGADQQISGLTVPSTPTGVFIAGFPQSAKVSIL
DIKDFAVLQTKSLGPPGESFPRSVLVAEVLANSQPTLFISMADGCVITFSLDSRDCSLSE
MNKLILGSEQPIFKKLPKGDGLYNVFATCENPSLIYGSEGRIIYSAVNSDGASRVCHLNA
EAYPDSIAVATEKELKIALVDRERTTQIQTLPMGSTVRRVAYSPSEKAFGIGTIDRKLEN
GAEVVKSHFVLADEIMFRRLDALELGPDELVESVVRAELPAGKDENGKEIVKDRFVVGTA
FADEDQEESIRGRILILEVDHGRKLSQVAELPVMGACRALAMMGDCIVAALVVVYRVKIN
NVGPMKLEKLAAYRTSTAPVDVTVVDNLIAVADLMKSLCLIRYTPGHTGEPAKLTEVGRH
YQTVWSTAIACVGDETFLQSDAEGNLIVLSRNTNGVTAQDKHRLIPTSEISLGEMVNRIR
PVHIPQLCSVMVTPRAFMATVEGSIFLFAVINPEHQDFLMTLQAALSQKLNSLGNLSFDK
FRGFRTMVRSAAAPYRFVDGELIEQFLKCTPSMQEEIAQEVGSSDVGEVKRLIEALRRLH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgtcgttcccatccatcgggcaagcagcattcgccatgcagtgaagcttaac
tttttttccccggacgaagagtgccttgttgcagcaaaagctagccgtctcgagttctac
acgctcactccggatggaatcgttctgaccgtgactcgtgctctgaatgcgcgggtcacg
atgctcgcgcgcctacccgcacccacaaattcaccaaccgaccacatcttcgtcggcaca
gaccaatacaactattttacgattacatgggatcgggaaacaaatgatatcaaaactgcg
cgtacctgcgttgacatcgccgagccctcgtctcgggagtcccaatgcgcaccacgatgt
ctgatcgatcccacgggacggttcatgacgctggaagtatacgagggcgtgatagtcgtc
gtgccgatcgtacagccgacgaagaaaaggggccggatgtccatggcagggtcccagcct
gacttcccgctgcaggtgggagagcttgacaagccgactacgtcccgcattgatgagctt
ttcgttcgatcctccgcatttttgcattcggaatctagtccttggttggcattactctac
gaagataaccaacagaaggtacggcttcgaatccgcgagctggatttcacaccgggcagt
tcggggactttggcagatgctactttcaaggaggtgcagaagttggaagggggtgaattc
ggacaggagcttgatcttggatcgtcgcatcttattcctatcccggctccgttgggaggt
cttattgttcttggggagacatcgattaagtacatcgacgataatgccaatgacgtgatc
acgcggcatcttgaagaggcgacagtcttcgtggcttgggagaaggtcgatagtcagcgg
tggctgttggctgatgactatggtaggctattcttcctgtcttttatcctgaacaacttg
ggcgaaatcgatgactggaagcttgagtctctgggtaagacggctcgtgcatcggtgttg
gtatatcttggtggaggcatgttgtttgttggctcgcatcacggcgactcccaggtcctc
cggctcgatggtacctcgttcgaggtaatccagacattgtctaacattgcacccattctc
gacttcactataatggatcttgggaaccgtacaaatgagagccaaacgcatgagttttcg
tccgggcaggctcgaatcgttactggctctggtgccttcgatgacgggacgctacgcagt
ctgcgcagtggtgttggcatggaagacttgggcgtgctgggagaaatggagcacatcagc
gatctttggggactgcaaactcgaagcacaggcgactacctagatacgcttattgttaca
tttgttgacgaaacgcgtgtgttccagtttagccctgacggtgaagttgaagaattggat
aacttcctcggactttcactcacggaatctacactgctcgccacaagacttcagggtggc
cgtattcttcaggttacagaacagcgagcgctggtggctgatctagaaagcggaatggtg
atatttgaatgggtgcctcaagaccagaagctgatcactgctgtgtcgaccaacgaggac
catctggtcctcgttattagtggccaaattgtggcctcctttgatatcagagacaatgtc
caaatcatcaaactgaaggatctcggtgctgaccagcaaatctctggcctgactgtccca
tcaacgccaacgggagtttttatcgcaggcttccctcaatcagccaaggtgtcaatcctg
gatatcaaggacttcgctgttcttcaaacgaaatcactaggtcctcccggagagagcttc
cctcgatcagttcttgtagccgaagtgctcgcaaacagccagcctaccctcttcatctcc
atggccgatggctgcgtcatcacattctccctagattcacgagactgctcgctaagtgag
atgaataagctgattcttggttccgaacaacccatcttcaagaaactccccaagggcgat
ggcctatacaatgtcttcgctacctgcgagaatcccagcctgatttatggttccgagggc
cggatcatctactctgcggtgaactccgatggtgcatcacgggtatgccatttgaacgca
gaggcatacccagactccatcgctgtggcaaccgagaaagagctgaaaatcgcgctggtt
gacagggagcgcacaacacaaattcaaacgttgccaatgggttccactgttcgtcgtgtt
gcatactctccttcagaaaaggcatttggaattggcacgattgatcgcaagctcgagaat
ggtgccgaggttgtgaagagccactttgtccttgccgatgagatcatgttccggcgtctt
gacgcgctagaactgggccctgacgaactggtggagagtgttgttcgcgccgagctccca
gcagggaaggatgaaaatggaaaagagatcgtgaaggaccgatttgttgtcggtacagcc
ttcgcagacgaagaccaagaggaatcgatccgcgggcggatccttattctagaagtcgat
catggccgcaagctgagccaagtcgctgaactaccagttatgggcgcctgtcgggctctc
gctatgatgggcgactgcattgtcgcggcacttgtcgttgtgtatagagtcaaaatcaat
aatgttggaccgatgaagcttgagaagctcgctgcataccggacctccaccgcaccagtc
gacgttacagtcgtcgacaacctaatagcagtggcagatctcatgaagagcctttgcctt
atcaggtatacaccgggccacactggggagcctgccaaactgaccgaagtcggtcgtcat
tatcagaccgtctggagcacagcaattgcttgcgtcggggacgagacattcctccagagt
gacgctgaaggaaatctcatcgttctttcgcggaacacgaatggtgtcaccgcccaggac
aaacacaggctgatccctactagcgaaatctcactaggggagatggttaatcgtatccga
ccagttcatattccacaactttgcagcgttatggtgacaccgcgggcgttcatggcgaca
gttgaaggctccattttcctctttgccgttatcaaccccgaacatcaagatttccttatg
accctgcaggctgctctttcccagaaactcaattcactaggcaacttgtcattcgacaag
ttccgcggcttcagaactatggtgcgcagcgctgctgcaccgtaccggtttgtggacggc
gagcttattgagcagttcttgaagtgcacaccgagcatgcaagaggagattgcgcaggaa
gttggctcctcagacgttggggaggtcaagagattgattgaggctttgcggagacttcac
tga
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integrated database retrieval system
