Penicillium digitatum: PDIP_39410
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Entry
PDIP_39410 CDS
T04849
Name
(RefSeq) DEAD box RNA helicase (Hca4), putative
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_39410
Enzymes [BR:
pdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PDIP_39410
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
90S particles
Helicases
PDIP_39410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
DUF7308
Motif
Other DBs
NCBI-GeneID:
26232259
NCBI-ProteinID:
XP_014535773
UniProt:
K9G195
A0A7T6XJK9
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MAPRAVKGKSKTHQDTGRVLKRKRGEDSLATLVKQVEDLDLKAPVKNFSDLPLSEPTAKG
LAASHFKTLTDIQSRAINHAFKGRDILGAAKTGSGKTLAFLVPILENLYRKKWTELDGLG
ALVLSPTRELAIQIFEVLRKIGRYHNFSAGLVIGGKSLREEQDRLGRMNILVCTPGRMLQ
HLDQTAMFETNNLQMLVLDEADRIMDMGFQKTVDAILDHLPKQRQTMLFSATQTKKVSDL
ARLSLQEPEYVSVHEAAASATPSTLQQHYTVTPLPQKLDTLWSFIRSNLKSKTVVFLSSG
KQVRFVYESLRQLQPGISLLHLHGRQKQGGRLDITTKFSQAQHAVLFATDVVARGLDFPA
VDWVIQMDCPEDADTYIHRVGRTARYERVGRAVLFLDPSEEKGFLKQLEHKKVPIEKINI
KSNKQQSVKNQLQNMCFKDPELKYLGQKAFISYVKSIYVQKDKETFKIKELPLEEYAASL
GLPGAPRIKFIKGDDAKERKNESWRMAHMSGDDDSEAEKKKDEKEVRTRYDRMFERRNQG
VLAEHYSKLINDDGTMVATDAPKDAGAEINDEADEDADFLSVKRRFAAGDAELGEKSDSS
DSEDSDAEPKTKDANGVKMVHLDGQDPLLIDSKRREKLLKSKKKLLKFKGKGTKLVYDDE
GNAHEVYEMEDEDTFKARGDANTQREKFLEGEAERTRQADIEDKEVMRKKRREKKEKRKA
RERAEAEAEMSEEEGGFSHLPHVPFEIPSSDSDSASEHEEPRPSKKQRVSFAESDSDDDK
PKSTKSQASARPIETLGDLEALASGLLG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgagcagttaaagggaagtcaaagactcaccaggacacagggagggtcttg
aaaagaaagcgtggtgaggatagtttagctaccctcgtcaagcaggtagaggacctcgat
ctcaaagctcccgtcaaaaacttctccgatctcccactctccgaaccaacagccaaaggt
ctcgcagcctcccatttcaaaacccttaccgacattcaatcgcgtgctatcaaccatgca
ttcaagggtcgcgatatcctcggtgccgccaaaaccggtagtggaaagaccctcgctttt
ctagtacccattctcgagaatctgtatcgcaagaagtggactgagttggatggtcttggc
gcacttgttctttcaccaactcgtgaactagcgattcaaatctttgaggtgcttcgcaag
atcggaagataccacaatttctctgctggattggttatcggtggaaagagtctgcgcgag
gaacaagatcgtctgggacgtatgaatatcctggtttgtacacctggtcgaatgttgcag
catctggatcagacagctatgtttgagacgaataacctgcagatgctggtgctggacgaa
gccgatcgtatcatggatatgggtttccagaagaccgtggatgctatccttgaccacctc
ccaaaacagcgccagactatgctgttcagtgccacacagaccaagaaggtcagtgatttg
gctcgtttgagtctgcaggaacccgagtacgtctcggttcacgaagcagccgcctccgcc
actccctcaactctccaacaacactacaccgttactccactcccacagaagcttgatacc
ctttggagtttcatccgcagcaacctcaaatctaagacagtggtcttcttgtcatcgggc
aagcaagttcgctttgtatacgaatcactaaggcagttgcagcctgggatttccttgctc
catttgcacgggcgacagaaacagggaggacgattggatatcaccacaaagttctctcag
gctcaacacgccgttcttttcgctactgatgttgttgctcgtggtctggatttccccgct
gtcgattgggtcattcaaatggattgtcctgaagacgctgatacctatattcatcgtgtc
ggacggacggcccgttacgagcgtgttggccgtgctgtactcttcctagaccctagcgag
gagaaagggttccttaagcagcttgagcacaagaaagttcccattgagaagatcaacatc
aaatcgaacaagcaacagagtgtcaagaatcagctgcaaaacatgtgtttcaaggatccg
gagttgaagtatctgggccagaaagctttcatctcctacgtcaagtcgatttacgtgcaa
aaggacaaggagacctttaagatcaaggagcttccgttggaagaatatgcagccagtctg
ggtcttcccggtgctccacgtattaagttcatcaagggcgacgatgcgaaagagcgcaag
aacgaatcctggagaatggcacacatgtccggcgatgatgactcagaggcagagaagaag
aaggatgagaaagaggtgcgaacacggtacgaccgtatgttcgagcgacgcaaccagggc
gtactggcagagcactactccaagctcatcaacgacgatggcaccatggtggctaccgat
gcccccaaggatgccggtgcggagatcaacgacgaggccgacgaggatgccgatttcctc
tcagtcaagcgccgcttcgctgcaggcgatgcagaactcggcgagaagagcgattcttcc
gactcggaggattccgacgccgagccaaagactaaagacgccaatggcgtcaagatggtg
cacttggacggtcaggatcccctactcatcgactcgaaacgacgcgaaaagctgctcaag
tcgaaaaaaaagctcctcaagttcaagggcaagggcacaaaattggtctacgacgacgag
ggcaatgcacacgaggtgtacgaaatggaagacgaagatacgttcaaggcccgcggcgac
gccaacactcagcgcgagaaattcctcgagggcgaggcggagcgcacacgccaggccgat
atcgaggacaaggaagttatgcgcaagaagcgacgcgagaagaaagagaagcgcaaggcg
cgcgagcgtgccgaggccgaggccgagatgtcggaggaggaaggtggtttctcgcacctt
ccccatgttcctttcgagattcccagctccgattcagactctgcctcggagcacgaagag
cctcgacccagcaaaaagcagcgtgtctcttttgcagagtcagacagcgacgacgacaag
cccaagagcacaaagagccaggcttctgccaggcctatcgaaactctgggggatctggag
gctttggccagtgggttgcttggttaa
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