| Entry |
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| Name |
(RefSeq) RNA polymerase II transcription factor related protein
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| KO |
| K03141 | transcription initiation factor TFIIH subunit 1 |
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| Organism |
pdp Penicillium digitatum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pdp00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PDIP_43030
09124 Replication and repair
03420 Nucleotide excision repair
PDIP_43030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pdp03021]
PDIP_43030
03400 DNA repair and recombination proteins [BR:pdp03400]
PDIP_43030
Transcription machinery [BR:pdp03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PDIP_43030
DNA repair and recombination proteins [BR:pdp03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PDIP_43030
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
642 aa
MSSPSGAASYKKKDGTLAISADEESVLWSPAIAGTANPITIPVINITNLQQTPASNPKVM
LKIFAQASDAPPNSMPDQYVFLFTAGANARSQADAIKDTLSVRVNTAKAGTPSQTPGPRG
SSEGLSAAMAIANAVTSAATSKNPLGDENKLRSDIELQQSLLRSDSNLQRMFFEGLHTKP
EALSSASFVSQFWSTRLHLLRAHAIEQGQTRGSYNVLSSLKPRVEDNVTRLNISKEQIQL
IFTQHALVKRVYDENVPKLSEQQFWSRFFQSRLFKKLRGERITEADATDAVLDKYLQTNE
AAQPDRNTSVHHFLDLAGNEVNHSQRRGNRPDLDMRPSGVEKVPIIRTLNSLSEKIMANV
APADGDMSAPIGINEEAWKKLQLQDLRGEEEQSRITLNIRDQSHFFTHSQEEEKTKQFAK
QDPDKLLHILRADINQSLPSQGNTQLGKLVDPGDDEDEEMEDAPASRRPVGSSAALHDAF
SQILGALRDRRTQTNERAASETYGLSMALFDRLTLTHATTTEFLHQFWQAFLSGNPDRAG
EVASLAESLQRAAERIKAVANDAEAERKVEVDRLKKQARDMYESTGRKLRVNLEGVEGGQ
KVVNQLLGPTLLALEVASTRYQKELAKQNKEAALASQEMAGV |
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| NT seq |
1929 nt +upstreamnt +downstreamnt
atgtcatctccgagcggagcggcctcttacaagaagaaagatgggaccctagctatatct
gcagatgaggagtcagtcttgtggagtcctgcaattgcagggactgcgaacccgatcaca
atccccgtgatcaacatcactaatctacagcagaccccagcctcgaatccgaaagtgatg
ctcaaaatttttgctcaagcttccgatgcgcctccgaatagtatgcccgatcaatatgtc
ttcctgttcacggctggagcaaacgcccgctcgcaggccgatgccatcaaagacacattg
agtgttcgagtcaataccgcgaaggcgggcacaccatcccagacgccggggcctagaggc
agttccgagggtctgtcagcggcaatggcgattgcaaacgctgtgacatctgcggcgaca
tcgaagaaccctttgggcgacgagaataagcttcggtccgacatagagctgcagcagtcg
ttattgaggtctgattcaaatctgcagcgaatgtttttcgaaggattgcatacaaaacca
gaagccttgtcgtccgcgtcgttcgtatcacaattctggtcaacacgactgcatttactg
cgagcgcacgcaatcgaacagggccaaacccgtggttcatataatgtgctatcttcactc
aagcctcgggtcgaggataacgtgacacgattgaatatcagtaaagagcaaatccagctg
atcttcacacaacacgcactggtcaaacgcgtgtatgacgagaatgtaccgaagctcagc
gagcaacaattctggtcacgatttttccagagtcgactatttaaaaaattgcgtggagag
cgcattacagaggctgacgcaaccgatgccgtgctcgacaaatacctccaaacgaatgag
gccgctcagccggaccggaacacaagtgttcatcactttttggacttggctggcaatgaa
gtgaaccacagccagcgtcgcggaaaccgtcctgacctagatatgaggccatctggcgtc
gaaaaagtgcccattattcggacactgaacagcctaagcgaaaagattatggccaatgtg
gctccggccgacggtgatatgagtgcgcccataggcatcaacgaagaggcatggaaaaag
ctccagctgcaggatcttcgcggagaagaagagcaaagtcgcatcactttgaacattcgt
gatcaaagccatttcttcactcacagtcaagaagaggaaaaaactaagcaatttgcgaaa
caagatccggataaacttcttcatattctccgtgcggacatcaatcaaagtcttccatcg
cagggcaacacacagctgggcaagttggtggaccccggcgacgatgaagacgaggagatg
gaggatgcacctgctagccgtcgacccgtcggatcatctgcagctctacacgatgcattc
tctcagatcctgggagcattgcgcgatcgccgcacccaaacaaatgagcgagcagcgtca
gaaacatatggactgtctatggcgctctttgaccgcttgacactgacacacgctacaacc
actgagtttttgcaccagttctggcaggcatttctctcgggaaacccagaccgtgctgga
gaggtcgcatccttagcagagtctcttcagcgagcggctgagcgcattaaagctgttgca
aatgacgcagaggctgagcggaaagtcgaagttgaccgattgaagaagcaggcccgtgac
atgtacgagagcaccgggcgaaaattacgagtcaacttagaaggcgtggagggaggccag
aaggttgtgaaccagcttctcggtcccacactccttgcactggaggtcgcatcgactcga
tatcaaaaagaattggccaaacaaaataaagaagcggccctggccagccaagagatggca
ggggtatag |
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