Penicillium digitatum: PDIP_43980
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Entry
PDIP_43980 CDS
T04849
Name
(RefSeq) SNF2 family helicase/ATPase, putative
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pdp
Penicillium digitatum
Pathway
pdp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PDIP_43980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdp03021
]
PDIP_43980
03036 Chromosome and associated proteins [BR:
pdp03036
]
PDIP_43980
Transcription machinery [BR:
pdp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
PDIP_43980
Chromosome and associated proteins [BR:
pdp03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
PDIP_43980
RSF complex
PDIP_43980
WICH complex
PDIP_43980
B-WICH complex
PDIP_43980
NORC complex
PDIP_43980
BRF complex
PDIP_43980
NuRF complex (fruit fly)
PDIP_43980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DEAD_2
Myb_DNA-binding
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
26232716
NCBI-ProteinID:
XP_014534688
UniProt:
K9FZ13
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MAPAIASDPVSQVDTPMTDTNDDTVPSVPVDSTDAQMTDSDTNPNTTASSVAGDAAADGR
RRRSEANNLRKSILGKKHGRLDNTKEDDSIRRFRYLLGLTDLFRHFIETNPNPEIKEIMA
EIDRQNAETEEKARKGSKRTGGAGSERRRRTEQEEDAELLQDEKQGGDSTTVFRESPAFI
HGELRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRYIRDINGPHLVVV
PKSTLDNWKREFAKWTPDIDVLVLQGNKEERQQLINERLVEEEFDVCITSYEMILREKSH
LKKFAWEYIVIDEAHRIKNEESSLSQIIRLFNSRNRLLITGTPLQNNLHELWALLNFLLP
DVFGDSEAFDQWFSNQDSDQETVVQQLHRVLRPFLLRRVKSDVEKSLLPKKELNLYVPMS
EMQRRWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD
EHLVFNSGKMVILDKLLKRMQADGSRVLIFSQMSRVLDILEDYCCFRDYNYCRIDGTTAH
EDRIAAIDDYNKPGSDKFVFLLTTRAGGLGINLTSADIVVLFDSDWNPQADLQAMDRAHR
IGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQQGRSGQQAGKASSKEDLLGMIQ
HGAADVFNTQGREGREISEDEDIETILRKGEERTAELSKKYETLGIDDLQKFSSESAYEW
NGKDFTERKKDIGISWINPAKRERKEQFYSIDKYYRQALATGGRTADTKPKVPRAPKQIT
VHDWQFFPPGLHELQEKETAYFHKEIGYKAQLPEGPDEELSEREAERDLEQQEIDNSIPL
TEEEQAEKARMSEEGFATWNRRDFQQFINGSAKFGRTDYKGIATEVDSKEPNEIKEYAEV
FWRRYTEIQDYPKYLRVIDQGEEKVRKIDHQRKMLRKKLEMYRVPLQQLKINYTVSTTNK
KVYTEDEDRFLLIMLDKYGVEGENLYENIREEIRESPLFRFDFFMLSRTPVEIGRRCTTL
LNTVAKEFESSEGKGRGRDRDEEEEMEEAPPSKKKAKNGAAPTKQVKGTKGGSKTASVAS
SLAPSAAATKSKSRKR
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgccatcgcgtctgatccggtctcgcaagttgacactcccatgactgataca
aatgacgacacggtcccttcggtgcccgtggatagtaccgacgcgcagatgacggactct
gatacaaatcccaacaccactgcaagcagcgttgcgggcgacgcggcggccgatggacgt
aggcgcagatccgaggccaacaacctcagaaaaagcatcttgggcaagaaacatggccgc
ctcgataatacgaaggaggatgattcgattcgccgattccgataccttcttggtctcact
gacctatttcgccacttcattgagacgaatccaaaccccgagatcaaggagattatggcc
gaaatcgaccgacaaaatgccgagacggaggaaaaagcccgcaaaggctctaagcgcact
ggaggtgctggtagtgagcggcgccgcagaaccgaacaagaagaagacgcagagctgcta
caagatgagaagcagggcggcgatagcaccaccgtctttcgagagtcgccagcattcatc
cacggtgagctacgtgattaccaggttgcaggcctgaattggctcgtttcgctacacgaa
aacggtatctccggtatcctggccgatgagatgggtcttggcaagaccctgcagacgata
tcattcctaggctacctacgttacatccgtgatattaacgggcctcatttggttgtcgtg
ccaaagtcaactctggacaactggaagcgagagttcgcaaagtggacccctgacatcgat
gtcctggtgctccaaggtaataaagaagaacggcagcagttgatcaatgagcgcttagtc
gaagaagagttcgatgtatgcatcaccagttatgaaatgatcctccgcgagaagtcgcat
ctgaagaagtttgcttgggaatacattgtcattgacgaggcccatcggatcaaaaacgaa
gaatcatcgttgtcgcaaatcatccgtcttttcaactcccgcaatcggttgttaattact
ggtactccgctacagaacaatctacatgaactgtgggctttgctcaacttccttctccca
gatgtcttcggcgattccgaggcatttgaccagtggttctcaaaccaggactccgatcaa
gaaactgtggtgcagcaactccaccgtgttctccgtcctttcttgcttcgacgtgtgaag
agtgatgttgagaaaagtttgttaccgaagaaggaactcaatctctatgttccaatgtct
gaaatgcaacggaggtggtaccaaaagattttggagaaagatattgatgctgtcaacggc
gccgctgggaagcgcgagtccaagacccgcttgttgaacattgtcatgcagctgcggaag
tgttgcaaccatccctacctgttcgagggagctgaaccaggtcctccgtatacgaccgac
gaacatcttgttttcaactcgggaaagatggtcattctggacaaacttttgaagcgcatg
caagcggatggtagtcgtgtactcatcttctctcagatgagtcgtgtgctggatatcttg
gaagattactgttgtttccgagactacaactactgccgtattgatggtaccacggcacat
gaggaccgcattgctgccattgatgattacaacaaacctggatccgacaaattcgttttt
cttctcaccactagagcgggtggtctgggtatcaacttgacctcggccgacatcgtcgtt
ctcttcgacagtgactggaacccgcaagctgatttgcaggccatggatcgagctcaccgc
attggccaaacgaagcaggttaaagtcttccgatttatcacagagaacgccatcgaagaa
aaagttctggagagagcagctcagaaactgcgcttggatcaactcgtcattcagcaaggt
cgttccggacaacaagctggcaaagcatcttcgaaagaagatctcctcggcatgattcag
catggtgctgccgacgtcttcaacacccaggggagagagggccgtgagatatccgaagac
gaagatatcgagactatcctgcgtaaaggcgaagaacgaactgcagagctcagcaagaag
tacgagacccttggcattgacgacttgcagaagttctcttctgagagtgcatatgaatgg
aatggcaaagatttcaccgagcggaagaaggatattggcatcagttggatcaacccagct
aagcgtgagcgcaaagagcaattctattccatcgacaaatactaccgccaagccttggcc
actggaggccgaactgccgacacaaagcccaaagtcccacgtgctcctaaacaaatcacc
gtccacgactggcaattcttccctcctggtctccatgagctccaagagaaggagacagcc
tatttccataaggagattggttacaaggctcaactgcctgaaggccccgacgaagagctc
agtgagcgagaggctgagcgggaccttgaacaacaggagattgacaactccattccactt
actgaggaagagcaagccgagaaggctcgtatgtcagaagaaggctttgcaacctggaac
cgacgtgatttccagcaatttattaatggatccgccaagtttggtcgtaccgactacaag
ggcattgccacggaggtggacagcaaggagcccaacgagattaaggaatatgccgaagtc
ttctggcgccgttacactgagattcaggactatccaaagtacctccgagttatcgatcag
ggcgaggagaaggtgcggaagatagatcaccagcggaaaatgctccgcaagaagttggag
atgtaccgcgtgccgcttcagcagctcaagatcaactacaccgtgtccaccaccaataaa
aaggtgtacaccgaggatgaggaccgattcttgttaatcatgctggacaagtatggggtc
gagggtgagaatttatatgaaaacatccgtgaagagattcgtgaatcacctctgttccga
ttcgatttcttcatgctcagtcgcacacctgtggaaattggtcgccgctgcactaccctg
ctgaacactgtggcgaaggagttcgagtccagtgaaggcaaaggccgcggccgtgaccgt
gatgaagaggaagagatggaagaagcgcccccttccaagaagaaggctaagaacggagct
gcgccaaccaaacaggtcaagggcaccaagggtggcagcaagactgcctctgtcgccagt
tccctagctcccagtgctgctgcaaccaagtctaagagtcgcaagaggtga
DBGET
integrated database retrieval system
